Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CPSF2Q9P2I0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CPSF2Q9P2I0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CPSF2Q9P2I0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CPSF2Q9P2I0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CPSF2Q9P2I0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CPSF2Q9P2I0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.84■■□□□ 1.57
CPSF2Q9P2I0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPSF2Q9P2I0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPSF2Q9P2I0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPSF2Q9P2I0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPSF2Q9P2I0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPSF2Q9P2I0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.82■■□□□ 1.56
CPSF2Q9P2I0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.81■■□□□ 1.56
CPSF2Q9P2I0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CPSF2Q9P2I0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPSF2Q9P2I0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPSF2Q9P2I0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPSF2Q9P2I0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPSF2Q9P2I0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CPSF2Q9P2I0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPSF2Q9P2I0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPSF2Q9P2I0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.79■■□□□ 1.56
CPSF2Q9P2I0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CPSF2Q9P2I0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPSF2Q9P2I0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CPSF2Q9P2I0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.78■■□□□ 1.56
CPSF2Q9P2I0 AC087741.3-201ENST00000624270 1347 ntBASIC24.78■■□□□ 1.56
CPSF2Q9P2I0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CPSF2Q9P2I0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPSF2Q9P2I0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPSF2Q9P2I0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.77■■□□□ 1.56
CPSF2Q9P2I0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.77■■□□□ 1.56
CPSF2Q9P2I0 AL162393.1-201ENST00000437852 946 ntBASIC24.76■■□□□ 1.55
CPSF2Q9P2I0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CPSF2Q9P2I0 AL449106.1-201ENST00000608517 1980 ntBASIC24.76■■□□□ 1.55
CPSF2Q9P2I0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.75■■□□□ 1.55
CPSF2Q9P2I0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.75■■□□□ 1.55
CPSF2Q9P2I0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.75■■□□□ 1.55
CPSF2Q9P2I0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPSF2Q9P2I0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CPSF2Q9P2I0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CPSF2Q9P2I0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPSF2Q9P2I0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.74■■□□□ 1.55
CPSF2Q9P2I0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.74■■□□□ 1.55
CPSF2Q9P2I0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPSF2Q9P2I0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF2Q9P2I0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.73■■□□□ 1.55
CPSF2Q9P2I0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF2Q9P2I0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF2Q9P2I0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF2Q9P2I0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.72■■□□□ 1.55
CPSF2Q9P2I0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF2Q9P2I0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF2Q9P2I0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF2Q9P2I0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF2Q9P2I0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.71■■□□□ 1.55
CPSF2Q9P2I0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF2Q9P2I0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CPSF2Q9P2I0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 AC044849.2-201ENST00000606596 710 ntBASIC24.7■■□□□ 1.54
CPSF2Q9P2I0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CPSF2Q9P2I0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CPSF2Q9P2I0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.69■■□□□ 1.54
CPSF2Q9P2I0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.69■■□□□ 1.54
CPSF2Q9P2I0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CPSF2Q9P2I0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.68■■□□□ 1.54
CPSF2Q9P2I0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CPSF2Q9P2I0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
CPSF2Q9P2I0 AC091060.1-201ENST00000623524 1766 ntBASIC24.67■■□□□ 1.54
CPSF2Q9P2I0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPSF2Q9P2I0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.66■■□□□ 1.54
CPSF2Q9P2I0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.65■■□□□ 1.54
CPSF2Q9P2I0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms