Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.63■□□□□ 0.89
CALYQ9NYX4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.62■□□□□ 0.89
CALYQ9NYX4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALYQ9NYX4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.62■□□□□ 0.89
CALYQ9NYX4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
CALYQ9NYX4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.62■□□□□ 0.89
CALYQ9NYX4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALYQ9NYX4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALYQ9NYX4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALYQ9NYX4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.62■□□□□ 0.89
CALYQ9NYX4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.62■□□□□ 0.89
CALYQ9NYX4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALYQ9NYX4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALYQ9NYX4 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.61■□□□□ 0.89
CALYQ9NYX4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CALYQ9NYX4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALYQ9NYX4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CALYQ9NYX4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALYQ9NYX4 AC008813.1-201ENST00000536597 885 ntBASIC20.6■□□□□ 0.89
CALYQ9NYX4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALYQ9NYX4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALYQ9NYX4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CALYQ9NYX4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALYQ9NYX4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CALYQ9NYX4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALYQ9NYX4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.59■□□□□ 0.89
CALYQ9NYX4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.59■□□□□ 0.89
CALYQ9NYX4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALYQ9NYX4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.58■□□□□ 0.89
CALYQ9NYX4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.58■□□□□ 0.89
CALYQ9NYX4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALYQ9NYX4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CALYQ9NYX4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CALYQ9NYX4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CALYQ9NYX4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALYQ9NYX4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CALYQ9NYX4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.57■□□□□ 0.88
CALYQ9NYX4 CR559946.2-201ENST00000623684 991 ntBASIC20.57■□□□□ 0.88
CALYQ9NYX4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALYQ9NYX4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALYQ9NYX4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALYQ9NYX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CALYQ9NYX4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CALYQ9NYX4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CALYQ9NYX4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CALYQ9NYX4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALYQ9NYX4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CALYQ9NYX4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALYQ9NYX4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CALYQ9NYX4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.55■□□□□ 0.88
CALYQ9NYX4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALYQ9NYX4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALYQ9NYX4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALYQ9NYX4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CALYQ9NYX4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.54■□□□□ 0.88
CALYQ9NYX4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
CALYQ9NYX4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.54■□□□□ 0.88
CALYQ9NYX4 AL449106.1-201ENST00000608517 1980 ntBASIC20.54■□□□□ 0.88
CALYQ9NYX4 WHAMMP3-201ENST00000611636 1609 ntBASIC20.53■□□□□ 0.88
CALYQ9NYX4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CALYQ9NYX4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.53■□□□□ 0.88
CALYQ9NYX4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALYQ9NYX4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALYQ9NYX4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALYQ9NYX4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALYQ9NYX4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CALYQ9NYX4 MIR3648-2-201ENST00000581792 180 ntBASIC20.52■□□□□ 0.88
CALYQ9NYX4 MIR3648-1-201ENST00000615959 180 ntBASIC20.52■□□□□ 0.88
CALYQ9NYX4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.52■□□□□ 0.88
CALYQ9NYX4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CALYQ9NYX4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CALYQ9NYX4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CALYQ9NYX4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.51■□□□□ 0.87
CALYQ9NYX4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.51■□□□□ 0.87
CALYQ9NYX4 AC148477.6-201ENST00000623746 465 ntBASIC20.51■□□□□ 0.87
CALYQ9NYX4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALYQ9NYX4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.51■□□□□ 0.87
CALYQ9NYX4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CALYQ9NYX4 MIR219A2-201ENST00000608502 1504 ntBASIC20.51■□□□□ 0.87
CALYQ9NYX4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALYQ9NYX4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALYQ9NYX4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CALYQ9NYX4 HLA-V-202ENST00000446817 847 ntBASIC20.5■□□□□ 0.87
CALYQ9NYX4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALYQ9NYX4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CALYQ9NYX4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALYQ9NYX4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.49■□□□□ 0.87
CALYQ9NYX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.49■□□□□ 0.87
CALYQ9NYX4 MIR7108-201ENST00000614319 87 ntBASIC20.49■□□□□ 0.87
CALYQ9NYX4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CALYQ9NYX4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
CALYQ9NYX4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALYQ9NYX4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALYQ9NYX4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CALYQ9NYX4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CALYQ9NYX4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALYQ9NYX4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALYQ9NYX4 AC016575.1-201ENST00000607026 382 ntBASIC20.47■□□□□ 0.87
CALYQ9NYX4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALYQ9NYX4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms