Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC5A7Q9GZV3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC5A7Q9GZV3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC5A7Q9GZV3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC5A7Q9GZV3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC5A7Q9GZV3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC5A7Q9GZV3 AC018358.1-201ENST00000631079 1402 ntBASIC20.83■□□□□ 0.93
SLC5A7Q9GZV3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SLC5A7Q9GZV3 AC135983.2-203ENST00000454486 1613 ntBASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SLC5A7Q9GZV3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC5A7Q9GZV3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SLC5A7Q9GZV3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC5A7Q9GZV3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC5A7Q9GZV3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC5A7Q9GZV3 AC020928.2-201ENST00000588717 2197 ntBASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC5A7Q9GZV3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC5A7Q9GZV3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC5A7Q9GZV3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC5A7Q9GZV3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC5A7Q9GZV3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC5A7Q9GZV3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
SLC5A7Q9GZV3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC5A7Q9GZV3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC5A7Q9GZV3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SLC5A7Q9GZV3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC5A7Q9GZV3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SLC5A7Q9GZV3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC5A7Q9GZV3 AC005559.1-201ENST00000589661 871 ntBASIC20.76■□□□□ 0.91
SLC5A7Q9GZV3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC5A7Q9GZV3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.76■□□□□ 0.91
SLC5A7Q9GZV3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC5A7Q9GZV3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC5A7Q9GZV3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC5A7Q9GZV3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC5A7Q9GZV3 AC108673.1-201ENST00000510422 1159 ntBASIC20.74■□□□□ 0.91
SLC5A7Q9GZV3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC5A7Q9GZV3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 AC093323.1-202ENST00000635031 2045 ntBASIC20.73■□□□□ 0.91
SLC5A7Q9GZV3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC5A7Q9GZV3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC5A7Q9GZV3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
SLC5A7Q9GZV3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC5A7Q9GZV3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC5A7Q9GZV3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC5A7Q9GZV3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC5A7Q9GZV3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC5A7Q9GZV3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC5A7Q9GZV3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC5A7Q9GZV3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC5A7Q9GZV3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC5A7Q9GZV3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC5A7Q9GZV3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 LINC00273-201ENST00000539813 1452 ntBASIC20.69■□□□□ 0.9
SLC5A7Q9GZV3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC5A7Q9GZV3 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.68■□□□□ 0.9
SLC5A7Q9GZV3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms