Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.12■■■□□ 2.57
SSH3Q8TE77 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SSH3Q8TE77 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.11■■■□□ 2.57
SSH3Q8TE77 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SSH3Q8TE77 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.11■■■□□ 2.57
SSH3Q8TE77 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SSH3Q8TE77 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SSH3Q8TE77 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SSH3Q8TE77 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SSH3Q8TE77 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SSH3Q8TE77 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SSH3Q8TE77 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
SSH3Q8TE77 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SSH3Q8TE77 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.09■■■□□ 2.57
SSH3Q8TE77 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SSH3Q8TE77 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SSH3Q8TE77 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.08■■■□□ 2.57
SSH3Q8TE77 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SSH3Q8TE77 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.07■■■□□ 2.56
SSH3Q8TE77 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SSH3Q8TE77 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.07■■■□□ 2.56
SSH3Q8TE77 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
SSH3Q8TE77 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.06■■■□□ 2.56
SSH3Q8TE77 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.06■■■□□ 2.56
SSH3Q8TE77 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.06■■■□□ 2.56
SSH3Q8TE77 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SSH3Q8TE77 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
SSH3Q8TE77 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SSH3Q8TE77 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SSH3Q8TE77 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SSH3Q8TE77 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.05■■■□□ 2.56
SSH3Q8TE77 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
SSH3Q8TE77 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SSH3Q8TE77 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
SSH3Q8TE77 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SSH3Q8TE77 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
SSH3Q8TE77 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
SSH3Q8TE77 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SSH3Q8TE77 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SSH3Q8TE77 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.02■■■□□ 2.56
SSH3Q8TE77 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.02■■■□□ 2.56
SSH3Q8TE77 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.01■■■□□ 2.55
SSH3Q8TE77 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.01■■■□□ 2.55
SSH3Q8TE77 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
SSH3Q8TE77 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.55
SSH3Q8TE77 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.01■■■□□ 2.55
SSH3Q8TE77 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SSH3Q8TE77 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
SSH3Q8TE77 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
SSH3Q8TE77 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31■■■□□ 2.55
SSH3Q8TE77 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
SSH3Q8TE77 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SSH3Q8TE77 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SSH3Q8TE77 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SSH3Q8TE77 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SSH3Q8TE77 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SSH3Q8TE77 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SSH3Q8TE77 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SSH3Q8TE77 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
SSH3Q8TE77 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SSH3Q8TE77 WHAMMP3-201ENST00000611636 1609 ntBASIC30.97■■■□□ 2.55
SSH3Q8TE77 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.97■■■□□ 2.55
SSH3Q8TE77 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SSH3Q8TE77 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
SSH3Q8TE77 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.96■■■□□ 2.55
SSH3Q8TE77 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SSH3Q8TE77 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SSH3Q8TE77 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.95■■■□□ 2.55
SSH3Q8TE77 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SSH3Q8TE77 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SSH3Q8TE77 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.94■■■□□ 2.54
SSH3Q8TE77 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
SSH3Q8TE77 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.93■■■□□ 2.54
SSH3Q8TE77 AL449106.1-201ENST00000608517 1980 ntBASIC30.93■■■□□ 2.54
SSH3Q8TE77 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SSH3Q8TE77 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SSH3Q8TE77 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SSH3Q8TE77 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SSH3Q8TE77 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SSH3Q8TE77 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.9■■■□□ 2.54
SSH3Q8TE77 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
SSH3Q8TE77 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SSH3Q8TE77 AC060814.1-201ENST00000554326 538 ntBASIC30.9■■■□□ 2.54
SSH3Q8TE77 AL359258.2-201ENST00000564063 1566 ntBASIC30.9■■■□□ 2.54
SSH3Q8TE77 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
SSH3Q8TE77 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.89■■■□□ 2.54
SSH3Q8TE77 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SSH3Q8TE77 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SSH3Q8TE77 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SSH3Q8TE77 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SSH3Q8TE77 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.88■■■□□ 2.53
SSH3Q8TE77 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SSH3Q8TE77 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.87■■■□□ 2.53
SSH3Q8TE77 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms