Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDND2Q8NHS1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDND2Q8NHS1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDND2Q8NHS1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLDND2Q8NHS1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDND2Q8NHS1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDND2Q8NHS1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CLDND2Q8NHS1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDND2Q8NHS1 AC060814.1-201ENST00000554326 538 ntBASIC21.11■□□□□ 0.97
CLDND2Q8NHS1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDND2Q8NHS1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDND2Q8NHS1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDND2Q8NHS1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CLDND2Q8NHS1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDND2Q8NHS1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDND2Q8NHS1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 AC100797.4-201ENST00000631653 1827 ntBASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDND2Q8NHS1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDND2Q8NHS1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDND2Q8NHS1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.08■□□□□ 0.96
CLDND2Q8NHS1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDND2Q8NHS1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDND2Q8NHS1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDND2Q8NHS1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDND2Q8NHS1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDND2Q8NHS1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDND2Q8NHS1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDND2Q8NHS1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDND2Q8NHS1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLDND2Q8NHS1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDND2Q8NHS1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDND2Q8NHS1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.06■□□□□ 0.96
CLDND2Q8NHS1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDND2Q8NHS1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CLDND2Q8NHS1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDND2Q8NHS1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDND2Q8NHS1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDND2Q8NHS1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDND2Q8NHS1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDND2Q8NHS1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDND2Q8NHS1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDND2Q8NHS1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDND2Q8NHS1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDND2Q8NHS1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDND2Q8NHS1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDND2Q8NHS1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDND2Q8NHS1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDND2Q8NHS1 AL121749.1-202ENST00000609313 2153 ntBASIC21.02■□□□□ 0.96
CLDND2Q8NHS1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLDND2Q8NHS1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLDND2Q8NHS1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 AC126177.7-201ENST00000547904 679 ntBASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDND2Q8NHS1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDND2Q8NHS1 NTF6A-201ENST00000591175 560 ntBASIC21■□□□□ 0.95
CLDND2Q8NHS1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21■□□□□ 0.95
CLDND2Q8NHS1 AL139393.2-201ENST00000608721 2025 ntBASIC21■□□□□ 0.95
CLDND2Q8NHS1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDND2Q8NHS1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDND2Q8NHS1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDND2Q8NHS1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 AC092296.2-201ENST00000589470 999 ntBASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDND2Q8NHS1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDND2Q8NHS1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDND2Q8NHS1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms