Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
KLHDC1Q8N7A1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 AP004833.2-201ENST00000532228 1454 ntBASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHDC1Q8N7A1 MIR219A2-201ENST00000608502 1504 ntBASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.93■□□□□ 0.78
KLHDC1Q8N7A1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHDC1Q8N7A1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 AC060814.1-201ENST00000554326 538 ntBASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHDC1Q8N7A1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC1Q8N7A1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC1Q8N7A1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC1Q8N7A1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC1Q8N7A1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHDC1Q8N7A1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KLHDC1Q8N7A1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHDC1Q8N7A1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.89■□□□□ 0.77
KLHDC1Q8N7A1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.89■□□□□ 0.77
KLHDC1Q8N7A1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.88■□□□□ 0.77
KLHDC1Q8N7A1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC1Q8N7A1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHDC1Q8N7A1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHDC1Q8N7A1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHDC1Q8N7A1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KLHDC1Q8N7A1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KLHDC1Q8N7A1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.87■□□□□ 0.77
KLHDC1Q8N7A1 NTF6A-201ENST00000591175 560 ntBASIC19.87■□□□□ 0.77
KLHDC1Q8N7A1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHDC1Q8N7A1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KLHDC1Q8N7A1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KLHDC1Q8N7A1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KLHDC1Q8N7A1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHDC1Q8N7A1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHDC1Q8N7A1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHDC1Q8N7A1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHDC1Q8N7A1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHDC1Q8N7A1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KLHDC1Q8N7A1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHDC1Q8N7A1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.84■□□□□ 0.77
KLHDC1Q8N7A1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHDC1Q8N7A1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHDC1Q8N7A1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KLHDC1Q8N7A1 AC100797.4-201ENST00000631653 1827 ntBASIC19.83■□□□□ 0.77
KLHDC1Q8N7A1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.83■□□□□ 0.77
KLHDC1Q8N7A1 AC126177.7-201ENST00000547904 679 ntBASIC19.83■□□□□ 0.77
KLHDC1Q8N7A1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHDC1Q8N7A1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHDC1Q8N7A1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHDC1Q8N7A1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
KLHDC1Q8N7A1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHDC1Q8N7A1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHDC1Q8N7A1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.82■□□□□ 0.76
KLHDC1Q8N7A1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 AL139393.2-201ENST00000608721 2025 ntBASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHDC1Q8N7A1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.8■□□□□ 0.76
KLHDC1Q8N7A1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.8■□□□□ 0.76
KLHDC1Q8N7A1 AC012354.3-201ENST00000623734 483 ntBASIC19.8■□□□□ 0.76
KLHDC1Q8N7A1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHDC1Q8N7A1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.78■□□□□ 0.76
KLHDC1Q8N7A1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.78■□□□□ 0.76
KLHDC1Q8N7A1 AC092296.2-201ENST00000589470 999 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms