Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD1Q8N668 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COMMD1Q8N668 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD1Q8N668 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD1Q8N668 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD1Q8N668 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.46■□□□□ 0.87
COMMD1Q8N668 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD1Q8N668 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD1Q8N668 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD1Q8N668 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.45■□□□□ 0.86
COMMD1Q8N668 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
COMMD1Q8N668 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD1Q8N668 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD1Q8N668 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.44■□□□□ 0.86
COMMD1Q8N668 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD1Q8N668 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD1Q8N668 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD1Q8N668 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD1Q8N668 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COMMD1Q8N668 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.43■□□□□ 0.86
COMMD1Q8N668 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.43■□□□□ 0.86
COMMD1Q8N668 LINC01971-201ENST00000617888 1048 ntBASIC20.43■□□□□ 0.86
COMMD1Q8N668 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD1Q8N668 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD1Q8N668 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD1Q8N668 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
COMMD1Q8N668 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.42■□□□□ 0.86
COMMD1Q8N668 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD1Q8N668 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD1Q8N668 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.42■□□□□ 0.86
COMMD1Q8N668 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.42■□□□□ 0.86
COMMD1Q8N668 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD1Q8N668 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.41■□□□□ 0.86
COMMD1Q8N668 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COMMD1Q8N668 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD1Q8N668 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COMMD1Q8N668 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.4■□□□□ 0.86
COMMD1Q8N668 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.4■□□□□ 0.86
COMMD1Q8N668 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD1Q8N668 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD1Q8N668 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
COMMD1Q8N668 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COMMD1Q8N668 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD1Q8N668 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.39■□□□□ 0.85
COMMD1Q8N668 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.38■□□□□ 0.85
COMMD1Q8N668 AC145676.1-201ENST00000514988 2004 ntBASIC20.37■□□□□ 0.85
COMMD1Q8N668 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD1Q8N668 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COMMD1Q8N668 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
COMMD1Q8N668 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD1Q8N668 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COMMD1Q8N668 LINC01003-201ENST00000564834 1764 ntBASIC20.36■□□□□ 0.85
COMMD1Q8N668 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD1Q8N668 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD1Q8N668 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD1Q8N668 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
COMMD1Q8N668 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD1Q8N668 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.35■□□□□ 0.85
COMMD1Q8N668 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.35■□□□□ 0.85
COMMD1Q8N668 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD1Q8N668 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COMMD1Q8N668 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD1Q8N668 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.34■□□□□ 0.85
COMMD1Q8N668 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD1Q8N668 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD1Q8N668 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD1Q8N668 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD1Q8N668 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD1Q8N668 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD1Q8N668 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COMMD1Q8N668 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.32■□□□□ 0.84
COMMD1Q8N668 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COMMD1Q8N668 DUX4L11-201ENST00000611504 1267 ntBASIC20.32■□□□□ 0.84
COMMD1Q8N668 DUX4L12-201ENST00000614593 1267 ntBASIC20.32■□□□□ 0.84
COMMD1Q8N668 DUX4L14-201ENST00000621227 1267 ntBASIC20.32■□□□□ 0.84
COMMD1Q8N668 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.32■□□□□ 0.84
COMMD1Q8N668 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COMMD1Q8N668 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD1Q8N668 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD1Q8N668 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.31■□□□□ 0.84
COMMD1Q8N668 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.31■□□□□ 0.84
COMMD1Q8N668 HLA-V-202ENST00000446817 847 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms