Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00311Q8N616 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00311Q8N616 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC00311Q8N616 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.31■□□□□ 0.84
LINC00311Q8N616 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00311Q8N616 MIR7108-201ENST00000614319 87 ntBASIC20.31■□□□□ 0.84
LINC00311Q8N616 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LINC00311Q8N616 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00311Q8N616 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00311Q8N616 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
LINC00311Q8N616 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00311Q8N616 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00311Q8N616 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00311Q8N616 MIR219A2-201ENST00000608502 1504 ntBASIC20.29■□□□□ 0.84
LINC00311Q8N616 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00311Q8N616 HLA-V-202ENST00000446817 847 ntBASIC20.29■□□□□ 0.84
LINC00311Q8N616 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00311Q8N616 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LINC00311Q8N616 WHAMMP3-201ENST00000611636 1609 ntBASIC20.28■□□□□ 0.84
LINC00311Q8N616 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LINC00311Q8N616 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LINC00311Q8N616 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00311Q8N616 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00311Q8N616 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00311Q8N616 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00311Q8N616 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LINC00311Q8N616 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00311Q8N616 AC016575.1-201ENST00000607026 382 ntBASIC20.27■□□□□ 0.84
LINC00311Q8N616 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00311Q8N616 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LINC00311Q8N616 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00311Q8N616 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LINC00311Q8N616 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00311Q8N616 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00311Q8N616 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00311Q8N616 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00311Q8N616 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00311Q8N616 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.26■□□□□ 0.83
LINC00311Q8N616 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
LINC00311Q8N616 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00311Q8N616 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00311Q8N616 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00311Q8N616 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC00311Q8N616 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
LINC00311Q8N616 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC00311Q8N616 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LINC00311Q8N616 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LINC00311Q8N616 AL449106.1-201ENST00000608517 1980 ntBASIC20.25■□□□□ 0.83
LINC00311Q8N616 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.24■□□□□ 0.83
LINC00311Q8N616 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00311Q8N616 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00311Q8N616 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LINC00311Q8N616 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00311Q8N616 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00311Q8N616 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00311Q8N616 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LINC00311Q8N616 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00311Q8N616 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00311Q8N616 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.22■□□□□ 0.83
LINC00311Q8N616 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00311Q8N616 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LINC00311Q8N616 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00311Q8N616 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00311Q8N616 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LINC00311Q8N616 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00311Q8N616 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00311Q8N616 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00311Q8N616 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LINC00311Q8N616 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00311Q8N616 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00311Q8N616 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00311Q8N616 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LINC00311Q8N616 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00311Q8N616 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
LINC00311Q8N616 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00311Q8N616 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00311Q8N616 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00311Q8N616 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00311Q8N616 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00311Q8N616 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00311Q8N616 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.19■□□□□ 0.82
LINC00311Q8N616 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00311Q8N616 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00311Q8N616 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00311Q8N616 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.18■□□□□ 0.82
LINC00311Q8N616 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.18■□□□□ 0.82
LINC00311Q8N616 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00311Q8N616 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC00311Q8N616 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.18■□□□□ 0.82
LINC00311Q8N616 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00311Q8N616 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00311Q8N616 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00311Q8N616 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00311Q8N616 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms