Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3H3Q8IXZ2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H3Q8IXZ2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H3Q8IXZ2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZC3H3Q8IXZ2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
ZC3H3Q8IXZ2 AL449106.1-201ENST00000608517 1980 ntBASIC27.31■■□□□ 1.96
ZC3H3Q8IXZ2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
ZC3H3Q8IXZ2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZC3H3Q8IXZ2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.3■■□□□ 1.96
ZC3H3Q8IXZ2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ZC3H3Q8IXZ2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZC3H3Q8IXZ2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ZC3H3Q8IXZ2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.29■■□□□ 1.96
ZC3H3Q8IXZ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZC3H3Q8IXZ2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3H3Q8IXZ2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H3Q8IXZ2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H3Q8IXZ2 ABHD17AP4-201ENST00000411545 909 ntBASIC27.27■■□□□ 1.96
ZC3H3Q8IXZ2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.27■■□□□ 1.96
ZC3H3Q8IXZ2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3H3Q8IXZ2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZC3H3Q8IXZ2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.25■■□□□ 1.95
ZC3H3Q8IXZ2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H3Q8IXZ2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZC3H3Q8IXZ2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 WHAMMP3-201ENST00000611636 1609 ntBASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 AC008813.1-201ENST00000536597 885 ntBASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.23■■□□□ 1.95
ZC3H3Q8IXZ2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
ZC3H3Q8IXZ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.22■■□□□ 1.95
ZC3H3Q8IXZ2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
ZC3H3Q8IXZ2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3H3Q8IXZ2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZC3H3Q8IXZ2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
ZC3H3Q8IXZ2 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.21■■□□□ 1.95
ZC3H3Q8IXZ2 AC148477.6-201ENST00000623746 465 ntBASIC27.21■■□□□ 1.95
ZC3H3Q8IXZ2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZC3H3Q8IXZ2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.21■■□□□ 1.95
ZC3H3Q8IXZ2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
ZC3H3Q8IXZ2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
ZC3H3Q8IXZ2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.2■■□□□ 1.94
ZC3H3Q8IXZ2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.19■■□□□ 1.94
ZC3H3Q8IXZ2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.19■■□□□ 1.94
ZC3H3Q8IXZ2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.19■■□□□ 1.94
ZC3H3Q8IXZ2 CR559946.2-201ENST00000623684 991 ntBASIC27.19■■□□□ 1.94
ZC3H3Q8IXZ2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ZC3H3Q8IXZ2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.18■■□□□ 1.94
ZC3H3Q8IXZ2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.18■■□□□ 1.94
ZC3H3Q8IXZ2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3H3Q8IXZ2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H3Q8IXZ2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.17■■□□□ 1.94
ZC3H3Q8IXZ2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H3Q8IXZ2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H3Q8IXZ2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.17■■□□□ 1.94
ZC3H3Q8IXZ2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
ZC3H3Q8IXZ2 HLA-V-202ENST00000446817 847 ntBASIC27.16■■□□□ 1.94
ZC3H3Q8IXZ2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
ZC3H3Q8IXZ2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
ZC3H3Q8IXZ2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H3Q8IXZ2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 MIR219A2-201ENST00000608502 1504 ntBASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 AP004609.3-201ENST00000610705 1884 ntBASIC27.15■■□□□ 1.94
ZC3H3Q8IXZ2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ZC3H3Q8IXZ2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.14■■□□□ 1.94
ZC3H3Q8IXZ2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.14■■□□□ 1.94
ZC3H3Q8IXZ2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.14■■□□□ 1.94
ZC3H3Q8IXZ2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZC3H3Q8IXZ2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ZC3H3Q8IXZ2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.14■■□□□ 1.93
ZC3H3Q8IXZ2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H3Q8IXZ2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H3Q8IXZ2 AC142472.1-201ENST00000612013 1741 ntBASIC27.13■■□□□ 1.93
ZC3H3Q8IXZ2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H3Q8IXZ2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.13■■□□□ 1.93
ZC3H3Q8IXZ2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H3Q8IXZ2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 MIR7108-201ENST00000614319 87 ntBASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H3Q8IXZ2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.11■■□□□ 1.93
ZC3H3Q8IXZ2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms