Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 ABHD17AP5-201ENST00000580133 923 ntBASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 AC018358.1-201ENST00000631079 1402 ntBASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 AC126177.7-201ENST00000547904 679 ntBASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 AL157400.5-201ENST00000507624 621 ntBASIC28.01■■■□□ 2.07
CCDC60Q8IWA6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
CCDC60Q8IWA6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.01■■■□□ 2.07
CCDC60Q8IWA6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
CCDC60Q8IWA6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CCDC60Q8IWA6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28■■■□□ 2.07
CCDC60Q8IWA6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28■■■□□ 2.07
CCDC60Q8IWA6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC60Q8IWA6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC60Q8IWA6 AL359258.2-201ENST00000564063 1566 ntBASIC27.98■■■□□ 2.07
CCDC60Q8IWA6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.97■■■□□ 2.07
CCDC60Q8IWA6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.97■■■□□ 2.07
CCDC60Q8IWA6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.96■■■□□ 2.07
CCDC60Q8IWA6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.96■■■□□ 2.07
CCDC60Q8IWA6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CCDC60Q8IWA6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
CCDC60Q8IWA6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
CCDC60Q8IWA6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CCDC60Q8IWA6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
CCDC60Q8IWA6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 ECEL1P2-201ENST00000461596 1295 ntBASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CCDC60Q8IWA6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CCDC60Q8IWA6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CCDC60Q8IWA6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CCDC60Q8IWA6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.92■■■□□ 2.06
CCDC60Q8IWA6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
CCDC60Q8IWA6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CCDC60Q8IWA6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.9■■■□□ 2.06
CCDC60Q8IWA6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
CCDC60Q8IWA6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.9■■■□□ 2.06
CCDC60Q8IWA6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CCDC60Q8IWA6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CCDC60Q8IWA6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 NTF6A-201ENST00000591175 560 ntBASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
CCDC60Q8IWA6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.83■■■□□ 2.05
CCDC60Q8IWA6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
CCDC60Q8IWA6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 U85056.1-201ENST00000616429 682 ntBASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CCDC60Q8IWA6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CCDC60Q8IWA6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CCDC60Q8IWA6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 AC007029.1-201ENST00000604183 313 ntBASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CCDC60Q8IWA6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.76■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms