Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 ABHD17AP5-201ENST00000580133 923 ntBASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 AC018358.1-201ENST00000631079 1402 ntBASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 AC126177.7-201ENST00000547904 679 ntBASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.03■■■□□ 2.08
CCDC60Q8IWA6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC60Q8IWA6 AL157400.5-201ENST00000507624 621 ntBASIC28.01■■■□□ 2.07
CCDC60Q8IWA6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
CCDC60Q8IWA6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.01■■■□□ 2.07
CCDC60Q8IWA6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
CCDC60Q8IWA6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CCDC60Q8IWA6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28■■■□□ 2.07
CCDC60Q8IWA6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28■■■□□ 2.07
CCDC60Q8IWA6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC60Q8IWA6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC60Q8IWA6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC60Q8IWA6 AL359258.2-201ENST00000564063 1566 ntBASIC27.98■■■□□ 2.07
CCDC60Q8IWA6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.97■■■□□ 2.07
CCDC60Q8IWA6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.97■■■□□ 2.07
CCDC60Q8IWA6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.96■■■□□ 2.07
CCDC60Q8IWA6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.96■■■□□ 2.07
CCDC60Q8IWA6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CCDC60Q8IWA6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
CCDC60Q8IWA6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
CCDC60Q8IWA6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CCDC60Q8IWA6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
CCDC60Q8IWA6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 ECEL1P2-201ENST00000461596 1295 ntBASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
CCDC60Q8IWA6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CCDC60Q8IWA6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CCDC60Q8IWA6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CCDC60Q8IWA6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CCDC60Q8IWA6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.92■■■□□ 2.06
CCDC60Q8IWA6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
CCDC60Q8IWA6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CCDC60Q8IWA6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.9■■■□□ 2.06
CCDC60Q8IWA6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
CCDC60Q8IWA6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.9■■■□□ 2.06
CCDC60Q8IWA6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CCDC60Q8IWA6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CCDC60Q8IWA6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CCDC60Q8IWA6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
CCDC60Q8IWA6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 NTF6A-201ENST00000591175 560 ntBASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CCDC60Q8IWA6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
CCDC60Q8IWA6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.83■■■□□ 2.05
CCDC60Q8IWA6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
CCDC60Q8IWA6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 U85056.1-201ENST00000616429 682 ntBASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CCDC60Q8IWA6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CCDC60Q8IWA6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CCDC60Q8IWA6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CCDC60Q8IWA6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CCDC60Q8IWA6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CCDC60Q8IWA6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 AC007029.1-201ENST00000604183 313 ntBASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CCDC60Q8IWA6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CCDC60Q8IWA6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.76■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms