Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 KRT18P60-201ENST00000312876 1297 ntBASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 AP002414.2-202ENST00000590929 1450 ntBASIC20.24■□□□□ 0.83
C9orf139Q6ZV77 AL359258.2-201ENST00000564063 1566 ntBASIC20.23■□□□□ 0.83
C9orf139Q6ZV77 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
C9orf139Q6ZV77 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf139Q6ZV77 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf139Q6ZV77 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
C9orf139Q6ZV77 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf139Q6ZV77 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf139Q6ZV77 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.22■□□□□ 0.83
C9orf139Q6ZV77 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf139Q6ZV77 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
C9orf139Q6ZV77 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf139Q6ZV77 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
C9orf139Q6ZV77 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.21■□□□□ 0.83
C9orf139Q6ZV77 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf139Q6ZV77 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
C9orf139Q6ZV77 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf139Q6ZV77 TSPY13P-201ENST00000338964 914 ntBASIC20.2■□□□□ 0.82
C9orf139Q6ZV77 AL033527.3-201ENST00000566366 1196 ntBASIC20.2■□□□□ 0.82
C9orf139Q6ZV77 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf139Q6ZV77 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
C9orf139Q6ZV77 ABCB10P3-201ENST00000561950 2166 ntBASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 SMPD5-203ENST00000639008 1464 ntBASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf139Q6ZV77 AC025884.2-201ENST00000553429 711 ntBASIC20.18■□□□□ 0.82
C9orf139Q6ZV77 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf139Q6ZV77 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 AC004987.1-201ENST00000428627 508 ntBASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 ATP5G2P3-201ENST00000429083 425 ntBASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf139Q6ZV77 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.16■□□□□ 0.82
C9orf139Q6ZV77 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.16■□□□□ 0.82
C9orf139Q6ZV77 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.16■□□□□ 0.82
C9orf139Q6ZV77 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
C9orf139Q6ZV77 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
C9orf139Q6ZV77 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
C9orf139Q6ZV77 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf139Q6ZV77 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf139Q6ZV77 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf139Q6ZV77 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf139Q6ZV77 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.15■□□□□ 0.82
C9orf139Q6ZV77 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.15■□□□□ 0.82
C9orf139Q6ZV77 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.14■□□□□ 0.82
C9orf139Q6ZV77 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf139Q6ZV77 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
C9orf139Q6ZV77 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf139Q6ZV77 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.14■□□□□ 0.81
C9orf139Q6ZV77 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf139Q6ZV77 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
C9orf139Q6ZV77 AC009831.1-201ENST00000580420 1582 ntBASIC20.13■□□□□ 0.81
C9orf139Q6ZV77 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.13■□□□□ 0.81
C9orf139Q6ZV77 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf139Q6ZV77 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf139Q6ZV77 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf139Q6ZV77 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf139Q6ZV77 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 AC133552.2-201ENST00000619106 1032 ntBASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf139Q6ZV77 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.11■□□□□ 0.81
C9orf139Q6ZV77 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf139Q6ZV77 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.11■□□□□ 0.81
C9orf139Q6ZV77 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
C9orf139Q6ZV77 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf139Q6ZV77 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.11■□□□□ 0.81
C9orf139Q6ZV77 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 AC026202.3-201ENST00000600805 1127 ntBASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 AC129492.7-201ENST00000622992 756 ntBASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
C9orf139Q6ZV77 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.09■□□□□ 0.81
C9orf139Q6ZV77 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf139Q6ZV77 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms