Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC144NLQ6NUI1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC144NLQ6NUI1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144NLQ6NUI1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144NLQ6NUI1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144NLQ6NUI1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144NLQ6NUI1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144NLQ6NUI1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144NLQ6NUI1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144NLQ6NUI1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144NLQ6NUI1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144NLQ6NUI1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144NLQ6NUI1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC144NLQ6NUI1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC144NLQ6NUI1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144NLQ6NUI1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144NLQ6NUI1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144NLQ6NUI1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC144NLQ6NUI1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC144NLQ6NUI1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144NLQ6NUI1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144NLQ6NUI1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC144NLQ6NUI1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144NLQ6NUI1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144NLQ6NUI1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC144NLQ6NUI1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCDC144NLQ6NUI1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC144NLQ6NUI1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144NLQ6NUI1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC144NLQ6NUI1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC144NLQ6NUI1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC144NLQ6NUI1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC144NLQ6NUI1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC144NLQ6NUI1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC144NLQ6NUI1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC144NLQ6NUI1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC144NLQ6NUI1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC144NLQ6NUI1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC144NLQ6NUI1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC144NLQ6NUI1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC144NLQ6NUI1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC144NLQ6NUI1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC144NLQ6NUI1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC144NLQ6NUI1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC144NLQ6NUI1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC144NLQ6NUI1 WHAMMP3-201ENST00000611636 1609 ntBASIC20.09■□□□□ 0.81
CCDC144NLQ6NUI1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC144NLQ6NUI1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC144NLQ6NUI1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC144NLQ6NUI1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC144NLQ6NUI1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC144NLQ6NUI1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC144NLQ6NUI1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC144NLQ6NUI1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC144NLQ6NUI1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC144NLQ6NUI1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC144NLQ6NUI1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC144NLQ6NUI1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC144NLQ6NUI1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC144NLQ6NUI1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC144NLQ6NUI1 AL359258.2-201ENST00000564063 1566 ntBASIC20.05■□□□□ 0.8
CCDC144NLQ6NUI1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC144NLQ6NUI1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC144NLQ6NUI1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC144NLQ6NUI1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC144NLQ6NUI1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC144NLQ6NUI1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC144NLQ6NUI1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC144NLQ6NUI1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CCDC144NLQ6NUI1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC144NLQ6NUI1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC144NLQ6NUI1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC144NLQ6NUI1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC144NLQ6NUI1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms