Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATPAF1Q5TC12 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ATPAF1Q5TC12 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATPAF1Q5TC12 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATPAF1Q5TC12 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATPAF1Q5TC12 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.45■■□□□ 1.02
ATPAF1Q5TC12 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF1Q5TC12 WHAMMP2-203ENST00000563942 1603 ntBASIC21.44■■□□□ 1.02
ATPAF1Q5TC12 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF1Q5TC12 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.44■■□□□ 1.02
ATPAF1Q5TC12 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF1Q5TC12 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.43■■□□□ 1.02
ATPAF1Q5TC12 LINC01971-201ENST00000617888 1048 ntBASIC21.43■■□□□ 1.02
ATPAF1Q5TC12 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF1Q5TC12 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF1Q5TC12 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF1Q5TC12 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF1Q5TC12 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF1Q5TC12 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.42■■□□□ 1.02
ATPAF1Q5TC12 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.41■■□□□ 1.02
ATPAF1Q5TC12 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF1Q5TC12 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF1Q5TC12 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.41■■□□□ 1.02
ATPAF1Q5TC12 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF1Q5TC12 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.41■■□□□ 1.02
ATPAF1Q5TC12 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 AC091060.1-201ENST00000623524 1766 ntBASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF1Q5TC12 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATPAF1Q5TC12 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATPAF1Q5TC12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF1Q5TC12 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
ATPAF1Q5TC12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF1Q5TC12 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF1Q5TC12 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
ATPAF1Q5TC12 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.38■■□□□ 1.01
ATPAF1Q5TC12 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ATPAF1Q5TC12 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF1Q5TC12 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.36■■□□□ 1.01
ATPAF1Q5TC12 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF1Q5TC12 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
ATPAF1Q5TC12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF1Q5TC12 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
ATPAF1Q5TC12 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF1Q5TC12 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF1Q5TC12 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.35■■□□□ 1.01
ATPAF1Q5TC12 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF1Q5TC12 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF1Q5TC12 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.34■■□□□ 1.01
ATPAF1Q5TC12 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.34■■□□□ 1.01
ATPAF1Q5TC12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.34■■□□□ 1.01
ATPAF1Q5TC12 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.33■■□□□ 1.01
ATPAF1Q5TC12 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.33■■□□□ 1.01
ATPAF1Q5TC12 DUX4L11-201ENST00000611504 1267 ntBASIC21.33■■□□□ 1.01
ATPAF1Q5TC12 DUX4L12-201ENST00000614593 1267 ntBASIC21.33■■□□□ 1.01
ATPAF1Q5TC12 DUX4L14-201ENST00000621227 1267 ntBASIC21.33■■□□□ 1.01
ATPAF1Q5TC12 AC100797.4-201ENST00000631653 1827 ntBASIC21.33■■□□□ 1.01
ATPAF1Q5TC12 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATPAF1Q5TC12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ATPAF1Q5TC12 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATPAF1Q5TC12 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF1Q5TC12 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATPAF1Q5TC12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.31■■□□□ 1
ATPAF1Q5TC12 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ATPAF1Q5TC12 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATPAF1Q5TC12 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L13-201ENST00000554103 1267 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L15-201ENST00000611059 1267 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L23-201ENST00000615195 1269 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L24-201ENST00000617576 1269 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L22-201ENST00000618238 1269 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L20-201ENST00000619712 1269 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L21-201ENST00000622058 1269 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L10-201ENST00000622460 1267 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 DUX4L25-201ENST00000624915 1269 ntBASIC21.31■■□□□ 1
ATPAF1Q5TC12 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATPAF1Q5TC12 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF1Q5TC12 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ATPAF1Q5TC12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATPAF1Q5TC12 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.3■■□□□ 1
ATPAF1Q5TC12 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.3■■□□□ 1
ATPAF1Q5TC12 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF1Q5TC12 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.3■■□□□ 1
ATPAF1Q5TC12 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.3■■□□□ 1
ATPAF1Q5TC12 AC020928.2-201ENST00000588717 2197 ntBASIC21.3■■□□□ 1
ATPAF1Q5TC12 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms