Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNAI3Q3KNW1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SNAI3Q3KNW1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SNAI3Q3KNW1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.63■■□□□ 1.05
SNAI3Q3KNW1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNAI3Q3KNW1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAI3Q3KNW1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 AL449106.1-201ENST00000608517 1980 ntBASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNAI3Q3KNW1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNAI3Q3KNW1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNAI3Q3KNW1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SNAI3Q3KNW1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.58■■□□□ 1.04
SNAI3Q3KNW1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 CR559946.2-201ENST00000623684 991 ntBASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNAI3Q3KNW1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNAI3Q3KNW1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNAI3Q3KNW1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 AC008813.1-201ENST00000536597 885 ntBASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SNAI3Q3KNW1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.52■■□□□ 1.03
SNAI3Q3KNW1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 HLA-V-202ENST00000446817 847 ntBASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 MIR219A2-201ENST00000608502 1504 ntBASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 MIR3648-2-201ENST00000581792 180 ntBASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 MIR3648-1-201ENST00000615959 180 ntBASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms