Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H3AP68431 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H3AP68431 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
HIST1H3AP68431 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST1H3AP68431 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HIST1H3AP68431 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.83■■□□□ 1.08
HIST1H3AP68431 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HIST1H3AP68431 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H3AP68431 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H3AP68431 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H3AP68431 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
HIST1H3AP68431 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H3AP68431 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.81■■□□□ 1.08
HIST1H3AP68431 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.81■■□□□ 1.08
HIST1H3AP68431 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HIST1H3AP68431 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H3AP68431 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HIST1H3AP68431 AC008813.1-201ENST00000536597 885 ntBASIC21.81■■□□□ 1.08
HIST1H3AP68431 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.81■■□□□ 1.08
HIST1H3AP68431 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.81■■□□□ 1.08
HIST1H3AP68431 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H3AP68431 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H3AP68431 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.8■■□□□ 1.08
HIST1H3AP68431 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HIST1H3AP68431 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.79■■□□□ 1.08
HIST1H3AP68431 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.79■■□□□ 1.08
HIST1H3AP68431 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.79■■□□□ 1.08
HIST1H3AP68431 AL449106.1-201ENST00000608517 1980 ntBASIC21.78■■□□□ 1.08
HIST1H3AP68431 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.78■■□□□ 1.08
HIST1H3AP68431 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.78■■□□□ 1.08
HIST1H3AP68431 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HIST1H3AP68431 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H3AP68431 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H3AP68431 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HIST1H3AP68431 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
HIST1H3AP68431 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H3AP68431 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.77■■□□□ 1.08
HIST1H3AP68431 WHAMMP3-201ENST00000611636 1609 ntBASIC21.77■■□□□ 1.07
HIST1H3AP68431 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.76■■□□□ 1.07
HIST1H3AP68431 AC148477.6-201ENST00000623746 465 ntBASIC21.76■■□□□ 1.07
HIST1H3AP68431 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H3AP68431 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H3AP68431 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H3AP68431 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
HIST1H3AP68431 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H3AP68431 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
HIST1H3AP68431 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H3AP68431 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H3AP68431 CR559946.2-201ENST00000623684 991 ntBASIC21.75■■□□□ 1.07
HIST1H3AP68431 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HIST1H3AP68431 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H3AP68431 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
HIST1H3AP68431 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST1H3AP68431 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H3AP68431 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H3AP68431 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HIST1H3AP68431 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H3AP68431 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H3AP68431 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H3AP68431 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H3AP68431 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.73■■□□□ 1.07
HIST1H3AP68431 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H3AP68431 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H3AP68431 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST1H3AP68431 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HIST1H3AP68431 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H3AP68431 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST1H3AP68431 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST1H3AP68431 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H3AP68431 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H3AP68431 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H3AP68431 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 HLA-V-202ENST00000446817 847 ntBASIC21.71■■□□□ 1.07
HIST1H3AP68431 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H3AP68431 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H3AP68431 MIR219A2-201ENST00000608502 1504 ntBASIC21.7■■□□□ 1.07
HIST1H3AP68431 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H3AP68431 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 MIR3648-2-201ENST00000581792 180 ntBASIC21.7■■□□□ 1.06
HIST1H3AP68431 MIR3648-1-201ENST00000615959 180 ntBASIC21.7■■□□□ 1.06
HIST1H3AP68431 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H3AP68431 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.7■■□□□ 1.06
HIST1H3AP68431 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H3AP68431 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.69■■□□□ 1.06
HIST1H3AP68431 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H3AP68431 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H3AP68431 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.68■■□□□ 1.06
HIST1H3AP68431 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H3AP68431 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HIST1H3AP68431 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms