Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A9P48067 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A9P48067 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A9P48067 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A9P48067 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC6A9P48067 LINC01971-201ENST00000617888 1048 ntBASIC21.85■■□□□ 1.09
SLC6A9P48067 AC135731.1-201ENST00000569415 2548 ntBASIC21.85■■□□□ 1.09
SLC6A9P48067 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC6A9P48067 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A9P48067 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A9P48067 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SLC6A9P48067 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A9P48067 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SLC6A9P48067 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A9P48067 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A9P48067 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC6A9P48067 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC6A9P48067 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A9P48067 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A9P48067 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A9P48067 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A9P48067 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SLC6A9P48067 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A9P48067 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A9P48067 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A9P48067 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A9P48067 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SLC6A9P48067 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A9P48067 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC6A9P48067 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC6A9P48067 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A9P48067 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A9P48067 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A9P48067 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC6A9P48067 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A9P48067 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A9P48067 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A9P48067 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC6A9P48067 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A9P48067 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC6A9P48067 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A9P48067 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC6A9P48067 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SLC6A9P48067 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC6A9P48067 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A9P48067 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A9P48067 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC6A9P48067 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A9P48067 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A9P48067 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A9P48067 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC6A9P48067 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A9P48067 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC6A9P48067 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A9P48067 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A9P48067 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC6A9P48067 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC6A9P48067 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SLC6A9P48067 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC6A9P48067 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A9P48067 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC6A9P48067 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC6A9P48067 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A9P48067 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SLC6A9P48067 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A9P48067 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A9P48067 DUX4L11-201ENST00000611504 1267 ntBASIC21.74■■□□□ 1.07
SLC6A9P48067 DUX4L12-201ENST00000614593 1267 ntBASIC21.74■■□□□ 1.07
SLC6A9P48067 DUX4L14-201ENST00000621227 1267 ntBASIC21.74■■□□□ 1.07
SLC6A9P48067 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SLC6A9P48067 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC6A9P48067 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC6A9P48067 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC6A9P48067 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC6A9P48067 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L13-201ENST00000554103 1267 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L15-201ENST00000611059 1267 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L23-201ENST00000615195 1269 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L24-201ENST00000617576 1269 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L22-201ENST00000618238 1269 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L20-201ENST00000619712 1269 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L21-201ENST00000622058 1269 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L10-201ENST00000622460 1267 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 DUX4L25-201ENST00000624915 1269 ntBASIC21.73■■□□□ 1.07
SLC6A9P48067 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC6A9P48067 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A9P48067 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A9P48067 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SLC6A9P48067 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SLC6A9P48067 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A9P48067 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A9P48067 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC6A9P48067 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A9P48067 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC6A9P48067 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A9P48067 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
SLC6A9P48067 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A9P48067 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A9P48067 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A9P48067 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms