Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.18■■□□□ 1.78
RARAP10276 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RARAP10276 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
RARAP10276 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RARAP10276 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.17■■□□□ 1.78
RARAP10276 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.17■■□□□ 1.78
RARAP10276 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RARAP10276 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.16■■□□□ 1.78
RARAP10276 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RARAP10276 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RARAP10276 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RARAP10276 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RARAP10276 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.16■■□□□ 1.78
RARAP10276 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RARAP10276 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RARAP10276 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RARAP10276 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RARAP10276 ZNRF2P2-203ENST00000454624 420 ntBASIC26.15■■□□□ 1.78
RARAP10276 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RARAP10276 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RARAP10276 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RARAP10276 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RARAP10276 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RARAP10276 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RARAP10276 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RARAP10276 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.12■■□□□ 1.77
RARAP10276 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RARAP10276 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
RARAP10276 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.11■■□□□ 1.77
RARAP10276 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RARAP10276 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RARAP10276 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.11■■□□□ 1.77
RARAP10276 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.1■■□□□ 1.77
RARAP10276 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RARAP10276 DUX4L13-201ENST00000554103 1267 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L15-201ENST00000611059 1267 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L11-201ENST00000611504 1267 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L12-201ENST00000614593 1267 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L23-201ENST00000615195 1269 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L24-201ENST00000617576 1269 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L22-201ENST00000618238 1269 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L20-201ENST00000619712 1269 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L14-201ENST00000621227 1267 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L21-201ENST00000622058 1269 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L10-201ENST00000622460 1267 ntBASIC26.1■■□□□ 1.77
RARAP10276 DUX4L25-201ENST00000624915 1269 ntBASIC26.1■■□□□ 1.77
RARAP10276 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.1■■□□□ 1.77
RARAP10276 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RARAP10276 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RARAP10276 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RARAP10276 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RARAP10276 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RARAP10276 AL449106.1-201ENST00000608517 1980 ntBASIC26.08■■□□□ 1.77
RARAP10276 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
RARAP10276 ABHD17AP4-201ENST00000411545 909 ntBASIC26.08■■□□□ 1.77
RARAP10276 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RARAP10276 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RARAP10276 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.06■■□□□ 1.76
RARAP10276 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RARAP10276 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RARAP10276 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.06■■□□□ 1.76
RARAP10276 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RARAP10276 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RARAP10276 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.05■■□□□ 1.76
RARAP10276 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.05■■□□□ 1.76
RARAP10276 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RARAP10276 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.04■■□□□ 1.76
RARAP10276 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.04■■□□□ 1.76
RARAP10276 AC091060.1-201ENST00000623524 1766 ntBASIC26.04■■□□□ 1.76
RARAP10276 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RARAP10276 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RARAP10276 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RARAP10276 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RARAP10276 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RARAP10276 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.02■■□□□ 1.76
RARAP10276 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
RARAP10276 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
RARAP10276 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26■■□□□ 1.75
RARAP10276 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RARAP10276 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RARAP10276 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
RARAP10276 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.98■■□□□ 1.75
RARAP10276 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RARAP10276 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RARAP10276 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.98■■□□□ 1.75
RARAP10276 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.98■■□□□ 1.75
RARAP10276 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RARAP10276 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
RARAP10276 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RARAP10276 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.97■■□□□ 1.75
RARAP10276 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RARAP10276 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
RARAP10276 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.96■■□□□ 1.75
RARAP10276 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.96■■□□□ 1.75
RARAP10276 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RARAP10276 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
RARAP10276 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RARAP10276 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RARAP10276 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RARAP10276 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms