Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBP04435 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.19■□□□□ 0.98
TCRBP04435 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBP04435 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBP04435 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBP04435 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBP04435 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.18■□□□□ 0.98
TCRBP04435 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBP04435 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBP04435 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBP04435 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBP04435 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBP04435 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBP04435 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBP04435 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBP04435 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TCRBP04435 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBP04435 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBP04435 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TCRBP04435 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBP04435 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBP04435 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBP04435 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBP04435 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBP04435 AC133561.1-201ENST00000568600 2415 ntBASIC21.15■□□□□ 0.98
TCRBP04435 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TCRBP04435 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.14■□□□□ 0.98
TCRBP04435 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBP04435 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBP04435 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBP04435 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBP04435 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBP04435 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBP04435 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBP04435 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
TCRBP04435 AC018358.1-201ENST00000631079 1402 ntBASIC21.13■□□□□ 0.97
TCRBP04435 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
TCRBP04435 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBP04435 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBP04435 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBP04435 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBP04435 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.12■□□□□ 0.97
TCRBP04435 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBP04435 AL031258.1-201ENST00000623562 325 ntBASIC21.11■□□□□ 0.97
TCRBP04435 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TCRBP04435 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBP04435 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBP04435 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBP04435 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBP04435 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBP04435 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBP04435 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBP04435 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.1■□□□□ 0.97
TCRBP04435 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBP04435 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TCRBP04435 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TCRBP04435 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBP04435 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
TCRBP04435 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBP04435 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBP04435 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBP04435 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.08■□□□□ 0.97
TCRBP04435 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBP04435 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBP04435 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBP04435 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBP04435 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBP04435 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TCRBP04435 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBP04435 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TCRBP04435 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBP04435 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBP04435 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TCRBP04435 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBP04435 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TCRBP04435 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.05■□□□□ 0.96
TCRBP04435 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TCRBP04435 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TCRBP04435 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TCRBP04435 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.04■□□□□ 0.96
TCRBP04435 AC012676.1-201ENST00000574705 1949 ntBASIC21.04■□□□□ 0.96
TCRBP04435 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBP04435 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBP04435 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBP04435 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBP04435 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms