Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC148477.6-201ENST00000623746 465 ntBASIC19.56■□□□□ 0.72
TRGV3P03979 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRGV3P03979 MIR219A2-201ENST00000608502 1504 ntBASIC19.56■□□□□ 0.72
TRGV3P03979 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRGV3P03979 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.55■□□□□ 0.72
TRGV3P03979 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.54■□□□□ 0.72
TRGV3P03979 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRGV3P03979 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRGV3P03979 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRGV3P03979 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRGV3P03979 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRGV3P03979 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRGV3P03979 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRGV3P03979 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRGV3P03979 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRGV3P03979 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRGV3P03979 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRGV3P03979 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.51■□□□□ 0.71
TRGV3P03979 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRGV3P03979 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRGV3P03979 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRGV3P03979 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.5■□□□□ 0.71
TRGV3P03979 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 MIR4449-201ENST00000578365 66 ntBASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRGV3P03979 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.49■□□□□ 0.71
TRGV3P03979 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV3P03979 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV3P03979 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.49■□□□□ 0.71
TRGV3P03979 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TRGV3P03979 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.49■□□□□ 0.71
TRGV3P03979 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV3P03979 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV3P03979 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV3P03979 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV3P03979 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV3P03979 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV3P03979 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.48■□□□□ 0.71
TRGV3P03979 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV3P03979 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV3P03979 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV3P03979 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV3P03979 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV3P03979 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV3P03979 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV3P03979 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.46■□□□□ 0.71
TRGV3P03979 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV3P03979 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.46■□□□□ 0.71
TRGV3P03979 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV3P03979 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TRGV3P03979 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV3P03979 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRGV3P03979 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV3P03979 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV3P03979 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV3P03979 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV3P03979 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.45■□□□□ 0.7
TRGV3P03979 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV3P03979 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV3P03979 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV3P03979 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV3P03979 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV3P03979 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV3P03979 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRGV3P03979 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRGV3P03979 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV3P03979 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.43■□□□□ 0.7
TRGV3P03979 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV3P03979 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV3P03979 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.43■□□□□ 0.7
TRGV3P03979 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV3P03979 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV3P03979 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.42■□□□□ 0.7
TRGV3P03979 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.42■□□□□ 0.7
TRGV3P03979 AC126177.7-201ENST00000547904 679 ntBASIC19.42■□□□□ 0.7
TRGV3P03979 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV3P03979 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV3P03979 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV3P03979 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.41■□□□□ 0.7
TRGV3P03979 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRGV3P03979 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.41■□□□□ 0.7
TRGV3P03979 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRGV3P03979 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRGV3P03979 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
TRGV3P03979 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRGV3P03979 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV3P03979 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV3P03979 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV3P03979 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV3P03979 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms