Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLPTM1O96005 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CLPTM1O96005 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLPTM1O96005 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
CLPTM1O96005 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CLPTM1O96005 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.27■■□□□ 1.32
CLPTM1O96005 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLPTM1O96005 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLPTM1O96005 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLPTM1O96005 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.26■■□□□ 1.31
CLPTM1O96005 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLPTM1O96005 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.26■■□□□ 1.31
CLPTM1O96005 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLPTM1O96005 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
CLPTM1O96005 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLPTM1O96005 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.26■■□□□ 1.31
CLPTM1O96005 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CLPTM1O96005 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLPTM1O96005 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLPTM1O96005 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLPTM1O96005 AP004833.2-201ENST00000532228 1454 ntBASIC23.25■■□□□ 1.31
CLPTM1O96005 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CLPTM1O96005 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLPTM1O96005 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.25■■□□□ 1.31
CLPTM1O96005 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLPTM1O96005 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CLPTM1O96005 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLPTM1O96005 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLPTM1O96005 AC133561.1-201ENST00000568600 2415 ntBASIC23.23■■□□□ 1.31
CLPTM1O96005 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPTM1O96005 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.23■■□□□ 1.31
CLPTM1O96005 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPTM1O96005 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPTM1O96005 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPTM1O96005 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CLPTM1O96005 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CLPTM1O96005 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLPTM1O96005 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLPTM1O96005 DUSP8P4-201ENST00000399538 1761 ntBASIC23.22■■□□□ 1.31
CLPTM1O96005 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.22■■□□□ 1.31
CLPTM1O96005 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLPTM1O96005 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLPTM1O96005 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLPTM1O96005 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CLPTM1O96005 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CLPTM1O96005 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLPTM1O96005 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLPTM1O96005 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
CLPTM1O96005 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLPTM1O96005 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLPTM1O96005 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.19■■□□□ 1.3
CLPTM1O96005 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.19■■□□□ 1.3
CLPTM1O96005 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CLPTM1O96005 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.19■■□□□ 1.3
CLPTM1O96005 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLPTM1O96005 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CLPTM1O96005 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLPTM1O96005 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLPTM1O96005 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLPTM1O96005 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CLPTM1O96005 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLPTM1O96005 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLPTM1O96005 AC010864.1-201ENST00000609407 1511 ntBASIC23.17■■□□□ 1.3
CLPTM1O96005 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.17■■□□□ 1.3
CLPTM1O96005 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CLPTM1O96005 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLPTM1O96005 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.16■■□□□ 1.3
CLPTM1O96005 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLPTM1O96005 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.16■■□□□ 1.3
CLPTM1O96005 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLPTM1O96005 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.14■■□□□ 1.3
CLPTM1O96005 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.14■■□□□ 1.3
CLPTM1O96005 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLPTM1O96005 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLPTM1O96005 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLPTM1O96005 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CLPTM1O96005 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CLPTM1O96005 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CLPTM1O96005 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CLPTM1O96005 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLPTM1O96005 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLPTM1O96005 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLPTM1O96005 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLPTM1O96005 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.12■■□□□ 1.29
CLPTM1O96005 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLPTM1O96005 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.12■■□□□ 1.29
CLPTM1O96005 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CLPTM1O96005 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.11■■□□□ 1.29
CLPTM1O96005 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLPTM1O96005 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.11■■□□□ 1.29
CLPTM1O96005 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLPTM1O96005 AC092803.2-201ENST00000564287 1899 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms