Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.86■□□□□ 0.93
ABCA1O95477 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA1O95477 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.86■□□□□ 0.93
ABCA1O95477 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA1O95477 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA1O95477 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCA1O95477 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
ABCA1O95477 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.84■□□□□ 0.93
ABCA1O95477 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA1O95477 DUX4L18-201ENST00000553347 1267 ntBASIC20.84■□□□□ 0.93
ABCA1O95477 AC009831.1-201ENST00000580420 1582 ntBASIC20.84■□□□□ 0.93
ABCA1O95477 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA1O95477 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.84■□□□□ 0.93
ABCA1O95477 ST7-AS1-201ENST00000456775 1889 ntBASIC20.84■□□□□ 0.93
ABCA1O95477 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.84■□□□□ 0.93
ABCA1O95477 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA1O95477 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ABCA1O95477 ABCB10P3-201ENST00000561950 2166 ntBASIC20.83■□□□□ 0.93
ABCA1O95477 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCA1O95477 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCA1O95477 AC009299.2-201ENST00000482477 511 ntBASIC20.83■□□□□ 0.93
ABCA1O95477 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCA1O95477 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ABCA1O95477 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA1O95477 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA1O95477 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA1O95477 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA1O95477 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA1O95477 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA1O95477 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
ABCA1O95477 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA1O95477 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ABCA1O95477 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA1O95477 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
ABCA1O95477 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.81■□□□□ 0.92
ABCA1O95477 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 AC019069.1-201ENST00000610008 1333 ntBASIC20.81■□□□□ 0.92
ABCA1O95477 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 RAP2CP1-202ENST00000605179 643 ntBASIC20.81■□□□□ 0.92
ABCA1O95477 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.81■□□□□ 0.92
ABCA1O95477 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA1O95477 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA1O95477 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA1O95477 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA1O95477 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA1O95477 AC025884.2-201ENST00000553429 711 ntBASIC20.8■□□□□ 0.92
ABCA1O95477 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ABCA1O95477 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ABCA1O95477 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA1O95477 DUX4L9-201ENST00000449051 1259 ntBASIC20.79■□□□□ 0.92
ABCA1O95477 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA1O95477 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ABCA1O95477 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.78■□□□□ 0.92
ABCA1O95477 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ABCA1O95477 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA1O95477 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCA1O95477 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ABCA1O95477 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA1O95477 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.78■□□□□ 0.92
ABCA1O95477 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA1O95477 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ABCA1O95477 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ABCA1O95477 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA1O95477 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.77■□□□□ 0.92
ABCA1O95477 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA1O95477 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA1O95477 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.77■□□□□ 0.92
ABCA1O95477 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
ABCA1O95477 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.76■□□□□ 0.91
ABCA1O95477 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.76■□□□□ 0.91
ABCA1O95477 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA1O95477 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ABCA1O95477 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA1O95477 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.76■□□□□ 0.91
ABCA1O95477 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ABCA1O95477 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCA1O95477 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCA1O95477 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA1O95477 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA1O95477 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA1O95477 AC093536.1-201ENST00000569153 554 ntBASIC20.75■□□□□ 0.91
ABCA1O95477 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA1O95477 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA1O95477 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ABCA1O95477 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA1O95477 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA1O95477 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms