Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIX6O95475 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SIX6O95475 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SIX6O95475 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX6O95475 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX6O95475 AC127502.1-201ENST00000399971 1502 ntBASIC20.81■□□□□ 0.92
SIX6O95475 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX6O95475 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX6O95475 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX6O95475 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX6O95475 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SIX6O95475 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX6O95475 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX6O95475 AP002414.2-202ENST00000590929 1450 ntBASIC20.79■□□□□ 0.92
SIX6O95475 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX6O95475 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SIX6O95475 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX6O95475 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SIX6O95475 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIX6O95475 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX6O95475 AL031258.1-201ENST00000623562 325 ntBASIC20.78■□□□□ 0.92
SIX6O95475 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIX6O95475 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIX6O95475 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SIX6O95475 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIX6O95475 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SIX6O95475 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIX6O95475 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX6O95475 ERN1-208ENST00000606895 2068 ntBASIC20.76■□□□□ 0.91
SIX6O95475 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SIX6O95475 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.76■□□□□ 0.91
SIX6O95475 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SIX6O95475 AC133561.1-201ENST00000568600 2415 ntBASIC20.75■□□□□ 0.91
SIX6O95475 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SIX6O95475 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX6O95475 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIX6O95475 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.75■□□□□ 0.91
SIX6O95475 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX6O95475 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SIX6O95475 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SIX6O95475 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX6O95475 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX6O95475 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX6O95475 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX6O95475 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX6O95475 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX6O95475 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SIX6O95475 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX6O95475 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SIX6O95475 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX6O95475 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
SIX6O95475 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIX6O95475 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.71■□□□□ 0.91
SIX6O95475 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SIX6O95475 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIX6O95475 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIX6O95475 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX6O95475 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIX6O95475 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX6O95475 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX6O95475 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX6O95475 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SIX6O95475 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX6O95475 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX6O95475 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIX6O95475 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
SIX6O95475 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIX6O95475 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.69■□□□□ 0.9
SIX6O95475 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX6O95475 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX6O95475 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIX6O95475 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIX6O95475 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.67■□□□□ 0.9
SIX6O95475 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX6O95475 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIX6O95475 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIX6O95475 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SIX6O95475 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SIX6O95475 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX6O95475 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX6O95475 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX6O95475 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIX6O95475 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.66■□□□□ 0.9
SIX6O95475 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SIX6O95475 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.65■□□□□ 0.9
SIX6O95475 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SIX6O95475 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.64■□□□□ 0.9
SIX6O95475 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SIX6O95475 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SIX6O95475 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIX6O95475 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.63■□□□□ 0.89
SIX6O95475 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIX6O95475 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.63■□□□□ 0.89
SIX6O95475 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms