Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1BO75841 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1BO75841 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
UPK1BO75841 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1BO75841 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1BO75841 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.88■■□□□ 1.09
UPK1BO75841 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.88■■□□□ 1.09
UPK1BO75841 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1BO75841 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
UPK1BO75841 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1BO75841 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1BO75841 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1BO75841 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1BO75841 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
UPK1BO75841 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1BO75841 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1BO75841 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1BO75841 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1BO75841 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1BO75841 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1BO75841 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1BO75841 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.85■■□□□ 1.09
UPK1BO75841 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1BO75841 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
UPK1BO75841 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1BO75841 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1BO75841 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1BO75841 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1BO75841 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1BO75841 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1BO75841 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPK1BO75841 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.82■■□□□ 1.08
UPK1BO75841 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.82■■□□□ 1.08
UPK1BO75841 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1BO75841 AC079834.2-201ENST00000609776 1949 ntBASIC21.82■■□□□ 1.08
UPK1BO75841 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.81■■□□□ 1.08
UPK1BO75841 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1BO75841 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1BO75841 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1BO75841 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
UPK1BO75841 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1BO75841 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
UPK1BO75841 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK1BO75841 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPK1BO75841 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.8■■□□□ 1.08
UPK1BO75841 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1BO75841 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.79■■□□□ 1.08
UPK1BO75841 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1BO75841 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UPK1BO75841 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1BO75841 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1BO75841 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1BO75841 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
UPK1BO75841 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.78■■□□□ 1.08
UPK1BO75841 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1BO75841 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1BO75841 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPK1BO75841 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UPK1BO75841 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPK1BO75841 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
UPK1BO75841 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1BO75841 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1BO75841 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1BO75841 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1BO75841 CLDN5-201ENST00000403084 2357 ntBASIC21.75■■□□□ 1.07
UPK1BO75841 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1BO75841 AC068473.5-201ENST00000616428 2072 ntBASIC21.75■■□□□ 1.07
UPK1BO75841 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
UPK1BO75841 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
UPK1BO75841 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
UPK1BO75841 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1BO75841 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPK1BO75841 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPK1BO75841 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
UPK1BO75841 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.74■■□□□ 1.07
UPK1BO75841 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPK1BO75841 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPK1BO75841 AC142381.3-201ENST00000568208 1670 ntBASIC21.73■■□□□ 1.07
UPK1BO75841 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
UPK1BO75841 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
UPK1BO75841 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPK1BO75841 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.73■■□□□ 1.07
UPK1BO75841 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPK1BO75841 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPK1BO75841 AP002414.2-202ENST00000590929 1450 ntBASIC21.72■■□□□ 1.07
UPK1BO75841 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPK1BO75841 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPK1BO75841 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.71■■□□□ 1.07
UPK1BO75841 AL139125.2-201ENST00000623134 1869 ntBASIC21.71■■□□□ 1.07
UPK1BO75841 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UPK1BO75841 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UPK1BO75841 AC100797.4-201ENST00000631653 1827 ntBASIC21.71■■□□□ 1.07
UPK1BO75841 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.7■■□□□ 1.06
UPK1BO75841 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.7■■□□□ 1.06
UPK1BO75841 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.69■■□□□ 1.06
UPK1BO75841 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPK1BO75841 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPK1BO75841 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPK1BO75841 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPK1BO75841 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms