Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
USH2AO75445 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
USH2AO75445 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
USH2AO75445 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
USH2AO75445 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.47□□□□□ -0.57
USH2AO75445 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
USH2AO75445 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
USH2AO75445 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
USH2AO75445 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
USH2AO75445 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
USH2AO75445 NALT1-201ENST00000429224 738 ntTSL 5 BASIC11.47□□□□□ -0.57
USH2AO75445 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
USH2AO75445 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
USH2AO75445 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
USH2AO75445 AC005837.3-201ENST00000612163 286 ntBASIC11.46□□□□□ -0.57
USH2AO75445 CREM-229ENST00000474362 1030 ntTSL 2 BASIC11.46□□□□□ -0.57
USH2AO75445 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC11.46□□□□□ -0.57
USH2AO75445 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
USH2AO75445 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
USH2AO75445 RNF146-205ENST00000477776 762 ntTSL 3 BASIC11.46□□□□□ -0.58
USH2AO75445 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.58
USH2AO75445 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
USH2AO75445 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC11.46□□□□□ -0.58
USH2AO75445 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
USH2AO75445 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
USH2AO75445 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC11.46□□□□□ -0.58
USH2AO75445 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
USH2AO75445 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC11.46□□□□□ -0.58
USH2AO75445 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
USH2AO75445 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
USH2AO75445 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
USH2AO75445 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC11.45□□□□□ -0.58
USH2AO75445 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC11.45□□□□□ -0.58
USH2AO75445 AC126177.7-201ENST00000547904 679 ntBASIC11.45□□□□□ -0.58
USH2AO75445 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
USH2AO75445 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
USH2AO75445 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
USH2AO75445 UNC93B8-201ENST00000511903 705 ntBASIC11.44□□□□□ -0.58
USH2AO75445 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
USH2AO75445 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
USH2AO75445 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC11.44□□□□□ -0.58
USH2AO75445 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
USH2AO75445 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC11.44□□□□□ -0.58
USH2AO75445 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC11.44□□□□□ -0.58
USH2AO75445 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC11.44□□□□□ -0.58
USH2AO75445 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC11.44□□□□□ -0.58
USH2AO75445 MIR4508-201ENST00000584178 70 ntBASIC11.44□□□□□ -0.58
USH2AO75445 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC11.43□□□□□ -0.58
USH2AO75445 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
USH2AO75445 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
USH2AO75445 AC135983.2-203ENST00000454486 1613 ntBASIC11.43□□□□□ -0.58
USH2AO75445 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
USH2AO75445 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
USH2AO75445 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC11.43□□□□□ -0.58
USH2AO75445 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC11.43□□□□□ -0.58
USH2AO75445 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
USH2AO75445 AC127502.1-201ENST00000399971 1502 ntBASIC11.42□□□□□ -0.58
USH2AO75445 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC11.42□□□□□ -0.58
USH2AO75445 PEX7-203ENST00000541292 945 ntTSL 5 BASIC11.42□□□□□ -0.58
USH2AO75445 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC11.42□□□□□ -0.58
USH2AO75445 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
USH2AO75445 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
USH2AO75445 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC11.42□□□□□ -0.58
USH2AO75445 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
USH2AO75445 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC11.42□□□□□ -0.58
USH2AO75445 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
USH2AO75445 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC11.42□□□□□ -0.58
USH2AO75445 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC11.41□□□□□ -0.58
USH2AO75445 ZNRF2P3-201ENST00000424200 374 ntBASIC11.41□□□□□ -0.58
USH2AO75445 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
USH2AO75445 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC11.41□□□□□ -0.58
USH2AO75445 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
USH2AO75445 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
USH2AO75445 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC11.41□□□□□ -0.58
USH2AO75445 AC018755.3-202ENST00000596210 929 ntBASIC11.41□□□□□ -0.58
USH2AO75445 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
USH2AO75445 AC120057.4-201ENST00000624722 1615 ntBASIC11.41□□□□□ -0.58
USH2AO75445 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
USH2AO75445 AC010864.1-201ENST00000609407 1511 ntBASIC11.41□□□□□ -0.58
USH2AO75445 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
USH2AO75445 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
USH2AO75445 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC11.41□□□□□ -0.58
USH2AO75445 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
USH2AO75445 IDNK-201ENST00000376417 511 ntTSL 5 BASIC11.4□□□□□ -0.58
USH2AO75445 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
USH2AO75445 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
USH2AO75445 GUK1-205ENST00000366722 850 ntTSL 3 BASIC11.4□□□□□ -0.58
USH2AO75445 AC131281.2-201ENST00000520478 145 ntBASIC11.4□□□□□ -0.58
USH2AO75445 TK2-216ENST00000564917 1156 ntTSL 3 BASIC11.4□□□□□ -0.58
USH2AO75445 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC11.4□□□□□ -0.58
USH2AO75445 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC11.39□□□□□ -0.59
USH2AO75445 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
USH2AO75445 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC11.39□□□□□ -0.59
USH2AO75445 AL161658.1-201ENST00000623641 1967 ntBASIC11.39□□□□□ -0.59
USH2AO75445 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC11.39□□□□□ -0.59
USH2AO75445 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC11.38□□□□□ -0.59
USH2AO75445 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms