Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FAM90A9PA6NNJ1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FAM90A9PA6NNJ1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.42■□□□□ 0.86
FAM90A9PA6NNJ1 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.42■□□□□ 0.86
FAM90A9PA6NNJ1 AC018358.1-201ENST00000631079 1402 ntBASIC20.42■□□□□ 0.86
FAM90A9PA6NNJ1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM90A9PA6NNJ1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.41■□□□□ 0.86
FAM90A9PA6NNJ1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM90A9PA6NNJ1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM90A9PA6NNJ1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.4■□□□□ 0.86
FAM90A9PA6NNJ1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.39■□□□□ 0.86
FAM90A9PA6NNJ1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FAM90A9PA6NNJ1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.39■□□□□ 0.85
FAM90A9PA6NNJ1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FAM90A9PA6NNJ1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FAM90A9PA6NNJ1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.38■□□□□ 0.85
FAM90A9PA6NNJ1 AC016575.1-201ENST00000607026 382 ntBASIC20.38■□□□□ 0.85
FAM90A9PA6NNJ1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FAM90A9PA6NNJ1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A9PA6NNJ1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.37■□□□□ 0.85
FAM90A9PA6NNJ1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A9PA6NNJ1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.37■□□□□ 0.85
FAM90A9PA6NNJ1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A9PA6NNJ1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A9PA6NNJ1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A9PA6NNJ1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
FAM90A9PA6NNJ1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
FAM90A9PA6NNJ1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A9PA6NNJ1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A9PA6NNJ1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A9PA6NNJ1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A9PA6NNJ1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A9PA6NNJ1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.34■□□□□ 0.85
FAM90A9PA6NNJ1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.34■□□□□ 0.85
FAM90A9PA6NNJ1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.34■□□□□ 0.85
FAM90A9PA6NNJ1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FAM90A9PA6NNJ1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
FAM90A9PA6NNJ1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FAM90A9PA6NNJ1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FAM90A9PA6NNJ1 MIR639-201ENST00000384974 98 ntBASIC20.33■□□□□ 0.85
FAM90A9PA6NNJ1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.33■□□□□ 0.85
FAM90A9PA6NNJ1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FAM90A9PA6NNJ1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A9PA6NNJ1 AC008813.1-201ENST00000536597 885 ntBASIC20.32■□□□□ 0.84
FAM90A9PA6NNJ1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A9PA6NNJ1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A9PA6NNJ1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A9PA6NNJ1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A9PA6NNJ1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A9PA6NNJ1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM90A9PA6NNJ1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FAM90A9PA6NNJ1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A9PA6NNJ1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FAM90A9PA6NNJ1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A9PA6NNJ1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.28■□□□□ 0.84
FAM90A9PA6NNJ1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A9PA6NNJ1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A9PA6NNJ1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A9PA6NNJ1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.27■□□□□ 0.84
FAM90A9PA6NNJ1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.27■□□□□ 0.84
FAM90A9PA6NNJ1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A9PA6NNJ1 HLA-V-202ENST00000446817 847 ntBASIC20.26■□□□□ 0.83
FAM90A9PA6NNJ1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM90A9PA6NNJ1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.26■□□□□ 0.83
FAM90A9PA6NNJ1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
FAM90A9PA6NNJ1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A9PA6NNJ1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
FAM90A9PA6NNJ1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A9PA6NNJ1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A9PA6NNJ1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FAM90A9PA6NNJ1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A9PA6NNJ1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FAM90A9PA6NNJ1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A9PA6NNJ1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A9PA6NNJ1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
FAM90A9PA6NNJ1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A9PA6NNJ1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.23■□□□□ 0.83
FAM90A9PA6NNJ1 AC148477.6-201ENST00000623746 465 ntBASIC20.23■□□□□ 0.83
FAM90A9PA6NNJ1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms