Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF222A6NCQ9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF222A6NCQ9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF222A6NCQ9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF222A6NCQ9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF222A6NCQ9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF222A6NCQ9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF222A6NCQ9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF222A6NCQ9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF222A6NCQ9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.37■□□□□ 0.85
RNF222A6NCQ9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF222A6NCQ9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RNF222A6NCQ9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF222A6NCQ9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF222A6NCQ9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF222A6NCQ9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF222A6NCQ9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF222A6NCQ9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF222A6NCQ9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF222A6NCQ9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF222A6NCQ9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RNF222A6NCQ9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF222A6NCQ9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF222A6NCQ9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF222A6NCQ9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF222A6NCQ9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF222A6NCQ9 AC012676.1-201ENST00000574705 1949 ntBASIC20.33■□□□□ 0.84
RNF222A6NCQ9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF222A6NCQ9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF222A6NCQ9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF222A6NCQ9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF222A6NCQ9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF222A6NCQ9 AC018358.1-201ENST00000631079 1402 ntBASIC20.32■□□□□ 0.84
RNF222A6NCQ9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF222A6NCQ9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF222A6NCQ9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 DYNLL1-208ENST00000550178 581 ntBASIC20.31■□□□□ 0.84
RNF222A6NCQ9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF222A6NCQ9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF222A6NCQ9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF222A6NCQ9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF222A6NCQ9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF222A6NCQ9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF222A6NCQ9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF222A6NCQ9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RNF222A6NCQ9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF222A6NCQ9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF222A6NCQ9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF222A6NCQ9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNF222A6NCQ9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF222A6NCQ9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF222A6NCQ9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF222A6NCQ9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF222A6NCQ9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF222A6NCQ9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF222A6NCQ9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF222A6NCQ9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF222A6NCQ9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF222A6NCQ9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF222A6NCQ9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF222A6NCQ9 AC142381.3-201ENST00000568208 1670 ntBASIC20.26■□□□□ 0.83
RNF222A6NCQ9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF222A6NCQ9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RNF222A6NCQ9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF222A6NCQ9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF222A6NCQ9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 AC006077.2-201ENST00000623591 457 ntBASIC20.24■□□□□ 0.83
RNF222A6NCQ9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF222A6NCQ9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF222A6NCQ9 LINC00543-201ENST00000567234 1845 ntBASIC20.23■□□□□ 0.83
RNF222A6NCQ9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF222A6NCQ9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF222A6NCQ9 AL139125.2-201ENST00000623134 1869 ntBASIC20.23■□□□□ 0.83
RNF222A6NCQ9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF222A6NCQ9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF222A6NCQ9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF222A6NCQ9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF222A6NCQ9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF222A6NCQ9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms