Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CENPVL3A0A0U1RRI6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPVL3A0A0U1RRI6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPVL3A0A0U1RRI6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPVL3A0A0U1RRI6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPVL3A0A0U1RRI6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPVL3A0A0U1RRI6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPVL3A0A0U1RRI6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPVL3A0A0U1RRI6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.33■□□□□ 0.85
CENPVL3A0A0U1RRI6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CENPVL3A0A0U1RRI6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.33■□□□□ 0.85
CENPVL3A0A0U1RRI6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.33■□□□□ 0.85
CENPVL3A0A0U1RRI6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CENPVL3A0A0U1RRI6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CENPVL3A0A0U1RRI6 AC018358.1-201ENST00000631079 1402 ntBASIC20.33■□□□□ 0.84
CENPVL3A0A0U1RRI6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.33■□□□□ 0.84
CENPVL3A0A0U1RRI6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 AL157400.5-201ENST00000507624 621 ntBASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.32■□□□□ 0.84
CENPVL3A0A0U1RRI6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CENPVL3A0A0U1RRI6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.31■□□□□ 0.84
CENPVL3A0A0U1RRI6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPVL3A0A0U1RRI6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPVL3A0A0U1RRI6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPVL3A0A0U1RRI6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPVL3A0A0U1RRI6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPVL3A0A0U1RRI6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 NTF6A-201ENST00000591175 560 ntBASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPVL3A0A0U1RRI6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.28■□□□□ 0.84
CENPVL3A0A0U1RRI6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CENPVL3A0A0U1RRI6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPVL3A0A0U1RRI6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPVL3A0A0U1RRI6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 DRD5P2-201ENST00000421395 2012 ntBASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPVL3A0A0U1RRI6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CENPVL3A0A0U1RRI6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CENPVL3A0A0U1RRI6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.25■□□□□ 0.83
CENPVL3A0A0U1RRI6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPVL3A0A0U1RRI6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CENPVL3A0A0U1RRI6 U85056.1-201ENST00000616429 682 ntBASIC20.24■□□□□ 0.83
CENPVL3A0A0U1RRI6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPVL3A0A0U1RRI6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.24■□□□□ 0.83
CENPVL3A0A0U1RRI6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CENPVL3A0A0U1RRI6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CENPVL3A0A0U1RRI6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CENPVL3A0A0U1RRI6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CENPVL3A0A0U1RRI6 SMPD5-203ENST00000639008 1464 ntBASIC20.23■□□□□ 0.83
CENPVL3A0A0U1RRI6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CENPVL3A0A0U1RRI6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CENPVL3A0A0U1RRI6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CENPVL3A0A0U1RRI6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CENPVL3A0A0U1RRI6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.21■□□□□ 0.83
CENPVL3A0A0U1RRI6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.21■□□□□ 0.83
CENPVL3A0A0U1RRI6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.21■□□□□ 0.83
CENPVL3A0A0U1RRI6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.2■□□□□ 0.82
CENPVL3A0A0U1RRI6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CENPVL3A0A0U1RRI6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.2■□□□□ 0.82
CENPVL3A0A0U1RRI6 AC007029.1-201ENST00000604183 313 ntBASIC20.2■□□□□ 0.82
CENPVL3A0A0U1RRI6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CENPVL3A0A0U1RRI6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CENPVL3A0A0U1RRI6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CENPVL3A0A0U1RRI6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CENPVL3A0A0U1RRI6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.19■□□□□ 0.82
CENPVL3A0A0U1RRI6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CENPVL3A0A0U1RRI6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CENPVL3A0A0U1RRI6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.18■□□□□ 0.82
CENPVL3A0A0U1RRI6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPVL3A0A0U1RRI6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CENPVL3A0A0U1RRI6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CENPVL3A0A0U1RRI6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CENPVL3A0A0U1RRI6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms