Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV24A0A0B4J272 AL449106.1-201ENST00000608517 1980 ntBASIC20.91■□□□□ 0.94
TRAV24A0A0B4J272 LINC01971-201ENST00000617888 1048 ntBASIC20.91■□□□□ 0.94
TRAV24A0A0B4J272 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV24A0A0B4J272 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV24A0A0B4J272 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV24A0A0B4J272 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV24A0A0B4J272 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV24A0A0B4J272 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV24A0A0B4J272 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV24A0A0B4J272 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAV24A0A0B4J272 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAV24A0A0B4J272 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV24A0A0B4J272 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV24A0A0B4J272 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAV24A0A0B4J272 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRAV24A0A0B4J272 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAV24A0A0B4J272 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 AP004609.3-201ENST00000610705 1884 ntBASIC20.84■□□□□ 0.93
TRAV24A0A0B4J272 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 WHAMMP3-201ENST00000611636 1609 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L13-201ENST00000554103 1267 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L15-201ENST00000611059 1267 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L23-201ENST00000615195 1269 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L24-201ENST00000617576 1269 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L22-201ENST00000618238 1269 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L20-201ENST00000619712 1269 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L21-201ENST00000622058 1269 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L10-201ENST00000622460 1267 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 DUX4L25-201ENST00000624915 1269 ntBASIC20.83■□□□□ 0.93
TRAV24A0A0B4J272 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TRAV24A0A0B4J272 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV24A0A0B4J272 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV24A0A0B4J272 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAV24A0A0B4J272 AC091060.1-201ENST00000623524 1766 ntBASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 DUX4L11-201ENST00000611504 1267 ntBASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 DUX4L12-201ENST00000614593 1267 ntBASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 DUX4L14-201ENST00000621227 1267 ntBASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRAV24A0A0B4J272 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAV24A0A0B4J272 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAV24A0A0B4J272 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAV24A0A0B4J272 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV24A0A0B4J272 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV24A0A0B4J272 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV24A0A0B4J272 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV24A0A0B4J272 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TRAV24A0A0B4J272 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV24A0A0B4J272 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRAV24A0A0B4J272 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV24A0A0B4J272 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV24A0A0B4J272 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV24A0A0B4J272 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV24A0A0B4J272 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 ZNRF2P2-203ENST00000454624 420 ntBASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV24A0A0B4J272 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV24A0A0B4J272 AC142472.1-201ENST00000612013 1741 ntBASIC20.75■□□□□ 0.91
TRAV24A0A0B4J272 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms