Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV2A0A0B4J234 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV2A0A0B4J234 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV2A0A0B4J234 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV2A0A0B4J234 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV2A0A0B4J234 MIR219A2-201ENST00000608502 1504 ntBASIC18.73■□□□□ 0.59
TRAV2A0A0B4J234 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV2A0A0B4J234 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV2A0A0B4J234 HLA-V-202ENST00000446817 847 ntBASIC18.72■□□□□ 0.59
TRAV2A0A0B4J234 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRAV2A0A0B4J234 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV2A0A0B4J234 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV2A0A0B4J234 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAV2A0A0B4J234 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV2A0A0B4J234 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV2A0A0B4J234 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV2A0A0B4J234 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV2A0A0B4J234 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV2A0A0B4J234 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV2A0A0B4J234 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV2A0A0B4J234 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 AC126177.7-201ENST00000547904 679 ntBASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.67■□□□□ 0.58
TRAV2A0A0B4J234 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV2A0A0B4J234 WHAMMP3-201ENST00000611636 1609 ntBASIC18.66■□□□□ 0.58
TRAV2A0A0B4J234 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV2A0A0B4J234 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV2A0A0B4J234 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV2A0A0B4J234 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV2A0A0B4J234 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms