Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV16A0A0A6YYK6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV16A0A0A6YYK6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV16A0A0A6YYK6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV16A0A0A6YYK6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV16A0A0A6YYK6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV16A0A0A6YYK6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.14■□□□□ 0.34
TRAV16A0A0A6YYK6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV16A0A0A6YYK6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV16A0A0A6YYK6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV16A0A0A6YYK6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV16A0A0A6YYK6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV16A0A0A6YYK6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV16A0A0A6YYK6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 AC145676.1-201ENST00000514988 2004 ntBASIC17.13■□□□□ 0.33
TRAV16A0A0A6YYK6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 AC044849.2-201ENST00000606596 710 ntBASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 DUX4L28-201ENST00000623687 678 ntBASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV16A0A0A6YYK6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV16A0A0A6YYK6 AC010864.1-201ENST00000609407 1511 ntBASIC17.11■□□□□ 0.33
TRAV16A0A0A6YYK6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV16A0A0A6YYK6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV16A0A0A6YYK6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV16A0A0A6YYK6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV16A0A0A6YYK6 AC108673.1-201ENST00000510422 1159 ntBASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 LINC01003-201ENST00000564834 1764 ntBASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV16A0A0A6YYK6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 AL162393.1-201ENST00000437852 946 ntBASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV16A0A0A6YYK6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV16A0A0A6YYK6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV16A0A0A6YYK6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV16A0A0A6YYK6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAV16A0A0A6YYK6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV16A0A0A6YYK6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV16A0A0A6YYK6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV16A0A0A6YYK6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV16A0A0A6YYK6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV16A0A0A6YYK6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV16A0A0A6YYK6 AC087741.3-201ENST00000624270 1347 ntBASIC17.04■□□□□ 0.32
TRAV16A0A0A6YYK6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms