Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV6A0A075B6T7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV6A0A075B6T7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV6A0A075B6T7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV6A0A075B6T7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV6A0A075B6T7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRAV6A0A075B6T7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV6A0A075B6T7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.28■■□□□ 1
TRAV6A0A075B6T7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV6A0A075B6T7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV6A0A075B6T7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV6A0A075B6T7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV6A0A075B6T7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV6A0A075B6T7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV6A0A075B6T7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
TRAV6A0A075B6T7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV6A0A075B6T7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV6A0A075B6T7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV6A0A075B6T7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAV6A0A075B6T7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV6A0A075B6T7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV6A0A075B6T7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRAV6A0A075B6T7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRAV6A0A075B6T7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV6A0A075B6T7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV6A0A075B6T7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV6A0A075B6T7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV6A0A075B6T7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV6A0A075B6T7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRAV6A0A075B6T7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV6A0A075B6T7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV6A0A075B6T7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 AC133561.1-201ENST00000568600 2415 ntBASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 ERN1-208ENST00000606895 2068 ntBASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV6A0A075B6T7 AP002414.2-202ENST00000590929 1450 ntBASIC21.21■□□□□ 0.99
TRAV6A0A075B6T7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV6A0A075B6T7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV6A0A075B6T7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV6A0A075B6T7 DYNLL1-208ENST00000550178 581 ntBASIC21.21■□□□□ 0.99
TRAV6A0A075B6T7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRAV6A0A075B6T7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRAV6A0A075B6T7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV6A0A075B6T7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAV6A0A075B6T7 AC127502.1-201ENST00000399971 1502 ntBASIC21.19■□□□□ 0.98
TRAV6A0A075B6T7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV6A0A075B6T7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRAV6A0A075B6T7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV6A0A075B6T7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
TRAV6A0A075B6T7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAV6A0A075B6T7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRAV6A0A075B6T7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.18■□□□□ 0.98
TRAV6A0A075B6T7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV6A0A075B6T7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV6A0A075B6T7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV6A0A075B6T7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV6A0A075B6T7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV6A0A075B6T7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV6A0A075B6T7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRAV6A0A075B6T7 AC006077.2-201ENST00000623591 457 ntBASIC21.15■□□□□ 0.98
TRAV6A0A075B6T7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV6A0A075B6T7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRAV6A0A075B6T7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV6A0A075B6T7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV6A0A075B6T7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV6A0A075B6T7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV6A0A075B6T7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAV6A0A075B6T7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV6A0A075B6T7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV6A0A075B6T7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV6A0A075B6T7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRAV6A0A075B6T7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV6A0A075B6T7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV6A0A075B6T7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV6A0A075B6T7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.11■□□□□ 0.97
TRAV6A0A075B6T7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms