Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 STARP1-201ENST00000397973 869 ntBASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 AC083849.1-201ENST00000615227 514 ntBASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB9Q9Y5E1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
PCDHB9Q9Y5E1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 SEC1P-202ENST00000473944 940 ntBASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHB9Q9Y5E1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 KRT8P50-201ENST00000562022 1438 ntBASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 AC004870.1-201ENST00000315132 882 ntBASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms