Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP000593.1-201ENST00000393668 712 ntBASIC21.31■■□□□ 1
CTDP1Q9Y5B0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 AC090616.6-201ENST00000582640 721 ntBASIC21.31■■□□□ 1
CTDP1Q9Y5B0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 GPR32P1-201ENST00000601788 811 ntBASIC21.31■■□□□ 1
CTDP1Q9Y5B0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTDP1Q9Y5B0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTDP1Q9Y5B0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 AL161938.1-201ENST00000569833 2180 ntBASIC21.29■■□□□ 1
CTDP1Q9Y5B0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.29■■□□□ 1
CTDP1Q9Y5B0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 AC111152.3-201ENST00000569699 673 ntBASIC21.29■■□□□ 1
CTDP1Q9Y5B0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.29■■□□□ 1
CTDP1Q9Y5B0 KRT8P50-201ENST00000562022 1438 ntBASIC21.29■■□□□ 1
CTDP1Q9Y5B0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 AC026396.1-201ENST00000419388 421 ntBASIC21.28■■□□□ 1
CTDP1Q9Y5B0 TOB2P1-201ENST00000469761 992 ntBASIC21.28■■□□□ 1
CTDP1Q9Y5B0 GUSBP12-201ENST00000513727 720 ntBASIC21.28■■□□□ 1
CTDP1Q9Y5B0 AL390719.2-201ENST00000606993 987 ntBASIC21.28■■□□□ 1
CTDP1Q9Y5B0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 AC073130.3-201ENST00000624389 2278 ntBASIC21.28■■□□□ 1
CTDP1Q9Y5B0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.28■■□□□ 1
CTDP1Q9Y5B0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms