Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDD3Q9Y3P4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
RHBDD3Q9Y3P4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 AC008764.6-201ENST00000595909 2069 ntBASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 AC116562.2-201ENST00000507042 360 ntBASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.18■□□□□ 0.18
RHBDD3Q9Y3P4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RHBDD3Q9Y3P4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 SLC25A1P4-201ENST00000567977 778 ntBASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms