Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 MESTP1-201ENST00000404287 994 ntBASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
POLR1DQ9Y2S0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 CRYGFP-201ENST00000418459 633 ntBASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 AC026471.5-201ENST00000615068 467 ntBASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 AC096733.2-201ENST00000609937 1394 ntBASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
POLR1DQ9Y2S0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 AL357033.4-201ENST00000617703 1807 ntBASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 AC116562.2-201ENST00000507042 360 ntBASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
POLR1DQ9Y2S0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms