Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 GNAS-203ENST00000306120 1878 ntBASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 AL353708.3-201ENST00000610272 989 ntBASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 AC011298.2-201ENST00000617989 482 ntBASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 AC138028.4-201ENST00000564984 1845 ntBASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPS28Q9Y2Q9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 CKBP1-201ENST00000565489 1086 ntBASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 FZD10-202ENST00000539839 3282 ntBASIC15.9■□□□□ 0.14
MRPS28Q9Y2Q9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 REXO1L9P-201ENST00000604264 2108 ntBASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 KRT16P1-201ENST00000399124 1418 ntBASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 ESRRAP1-201ENST00000400596 1257 ntBASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.89■□□□□ 0.13
MRPS28Q9Y2Q9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms