Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 AC092597.1-201ENST00000487352 616 ntBASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 MIR3180-5-201ENST00000583743 153 ntBASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 AL020996.1-203ENST00000536896 2307 ntBASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
NPIPA1Q9UND3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 HBZP1-201ENST00000354915 429 ntBASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA1Q9UND3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17■□□□□ 0.31
NPIPA1Q9UND3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 KRT8P3-201ENST00000519669 1449 ntBASIC17■□□□□ 0.31
NPIPA1Q9UND3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 AL121894.2-201ENST00000602977 491 ntBASIC17■□□□□ 0.31
NPIPA1Q9UND3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA1Q9UND3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA1Q9UND3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NPIPA1Q9UND3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms