Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 PVRIG2P-201ENST00000435460 978 ntBASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA4Q9UN74 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 FAM8A6P-201ENST00000407496 1135 ntBASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 AC022616.7-201ENST00000525383 220 ntBASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHA4Q9UN74 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 AL359075.1-203ENST00000462729 1002 ntBASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 AC079602.3-201ENST00000623931 403 ntBASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA4Q9UN74 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 AC092647.4-201ENST00000457211 535 ntBASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 GMCL1P1-201ENST00000463439 1581 ntBASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 ESPNP-201ENST00000270691 2015 ntBASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA4Q9UN74 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms