Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 KRT89P-201ENST00000620027 1478 ntBASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 AL353692.3-201ENST00000407031 1396 ntBASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 TSPY19P-201ENST00000418461 509 ntBASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 TSPY18P-201ENST00000441642 509 ntBASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 AC091304.2-201ENST00000564639 760 ntBASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT1Q9P2V4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 AC074051.2-201ENST00000565115 352 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 LINC01711-201ENST00000598340 967 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 Z69720.1-201ENST00000601483 472 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 IFNL4P1-201ENST00000607083 540 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 AL732292.2-201ENST00000609649 430 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 AL592071.1-201ENST00000611956 408 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 AC233702.3-201ENST00000578656 1387 ntBASIC17.79■□□□□ 0.44
LRIT1Q9P2V4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 LINC00167-201ENST00000530583 1419 ntBASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRIT1Q9P2V4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.77■□□□□ 0.44
LRIT1Q9P2V4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms