Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 GCSHP2-201ENST00000560971 527 ntBASIC19.03■□□□□ 0.64
VPS45Q9NRW7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 AL109659.2-201ENST00000606809 1674 ntBASIC19.03■□□□□ 0.64
VPS45Q9NRW7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 RCC2P3-201ENST00000418112 1537 ntBASIC19.03■□□□□ 0.64
VPS45Q9NRW7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.02■□□□□ 0.64
VPS45Q9NRW7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.02■□□□□ 0.64
VPS45Q9NRW7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 FAAHP1-202ENST00000446499 1238 ntBASIC19.02■□□□□ 0.64
VPS45Q9NRW7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 AC092329.2-201ENST00000598402 547 ntBASIC19.02■□□□□ 0.64
VPS45Q9NRW7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.02■□□□□ 0.64
VPS45Q9NRW7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VPS45Q9NRW7 ANO7L1-203ENST00000602586 1720 ntBASIC19.02■□□□□ 0.63
VPS45Q9NRW7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.02■□□□□ 0.63
VPS45Q9NRW7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS45Q9NRW7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
VPS45Q9NRW7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.02■□□□□ 0.63
VPS45Q9NRW7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS45Q9NRW7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
VPS45Q9NRW7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19■□□□□ 0.63
VPS45Q9NRW7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19■□□□□ 0.63
VPS45Q9NRW7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VPS45Q9NRW7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19■□□□□ 0.63
VPS45Q9NRW7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19■□□□□ 0.63
VPS45Q9NRW7 AL845331.1-201ENST00000424978 1190 ntBASIC19■□□□□ 0.63
VPS45Q9NRW7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VPS45Q9NRW7 KRT17P6-201ENST00000453795 1220 ntBASIC19■□□□□ 0.63
VPS45Q9NRW7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19■□□□□ 0.63
VPS45Q9NRW7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VPS45Q9NRW7 CR769767.2-201ENST00000622735 460 ntBASIC19■□□□□ 0.63
VPS45Q9NRW7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19■□□□□ 0.63
VPS45Q9NRW7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VPS45Q9NRW7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19■□□□□ 0.63
VPS45Q9NRW7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS45Q9NRW7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms