Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
SPHK2Q9NRA0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 AL499627.1-201ENST00000569373 2188 ntBASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 AL845331.1-201ENST00000424978 1190 ntBASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 KRT17P6-201ENST00000453795 1220 ntBASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 AC113404.2-201ENST00000507884 177 ntBASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 AC091304.2-201ENST00000564639 760 ntBASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 IFNL4P1-201ENST00000607083 540 ntBASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK2Q9NRA0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 VENTXP7-201ENST00000475503 772 ntBASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPHK2Q9NRA0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 IGHV3-47-201ENST00000425060 335 ntBASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 KRT18P31-201ENST00000506277 1292 ntBASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 AC099336.1-202ENST00000602961 463 ntBASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SPHK2Q9NRA0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
SPHK2Q9NRA0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 FAAHP1-202ENST00000446499 1238 ntBASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.76■□□□□ 0.59
SPHK2Q9NRA0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms