Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 SLC25A1P2-201ENST00000430693 912 ntBASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEUROD4Q9HD90 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEUROD4Q9HD90 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.41■□□□□ 0.38
NEUROD4Q9HD90 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms