Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 HBZP1-201ENST00000354915 429 ntBASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 AC006333.2-201ENST00000607957 2099 ntBASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCP1Q9H5V8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC104390.1-201ENST00000555663 520 ntBASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 MIR3917-201ENST00000580971 93 ntBASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 HOXB1-202ENST00000577092 1414 ntBASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDCP1Q9H5V8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 HEIH-201ENST00000623091 1652 ntBASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCP1Q9H5V8 AC116407.4-201ENST00000623319 1061 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms