Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ARMC10P1-201ENST00000313754 855 ntBASIC21.72■■□□□ 1.07
RNF41Q9H4P4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF41Q9H4P4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 AC005082.1-201ENST00000413042 2259 ntBASIC21.71■■□□□ 1.07
RNF41Q9H4P4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 AC008687.5-201ENST00000593746 558 ntBASIC21.71■■□□□ 1.07
RNF41Q9H4P4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF41Q9H4P4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.07
RNF41Q9H4P4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF41Q9H4P4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 AL136038.3-201ENST00000561909 1096 ntBASIC21.7■■□□□ 1.06
RNF41Q9H4P4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF41Q9H4P4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF41Q9H4P4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF41Q9H4P4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms