Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 KRT8P3-201ENST00000519669 1449 ntBASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MS4A6AQ9H2W1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 AL354751.1-201ENST00000412768 1863 ntBASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 RBM17P1-201ENST00000453646 1190 ntBASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 AC083906.6-201ENST00000641366 219 ntBASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A6AQ9H2W1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 BICD1-207ENST00000551848 1962 ntBASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A6AQ9H2W1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms