Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2OQ9C0C9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBE2OQ9C0C9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2OQ9C0C9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 AC096582.2-201ENST00000510860 516 ntBASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2OQ9C0C9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 KRT18P3-201ENST00000451602 1288 ntBASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2OQ9C0C9 KRT8P7-201ENST00000533003 1432 ntBASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 DNAJB3-202ENST00000449667 1266 ntBASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 IGHV3-22-201ENST00000520721 359 ntBASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 AC040169.1-201ENST00000565382 521 ntBASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2OQ9C0C9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2OQ9C0C9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2OQ9C0C9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2OQ9C0C9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.27■□□□□ 0.83
UBE2OQ9C0C9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2OQ9C0C9 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 AC114341.1-201ENST00000618070 349 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms