Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
LIMD2Q9BT23 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC11□□□□□ -0.65
LIMD2Q9BT23 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LIMD2Q9BT23 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11□□□□□ -0.65
LIMD2Q9BT23 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 NIFKP9-201ENST00000419265 221 ntBASIC11□□□□□ -0.65
LIMD2Q9BT23 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 KSR1P1-201ENST00000446298 240 ntBASIC11□□□□□ -0.65
LIMD2Q9BT23 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 PRSS44-201ENST00000515154 1146 ntBASIC11□□□□□ -0.65
LIMD2Q9BT23 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC11□□□□□ -0.65
LIMD2Q9BT23 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 AC026271.3-201ENST00000571884 352 ntBASIC11□□□□□ -0.65
LIMD2Q9BT23 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC11□□□□□ -0.65
LIMD2Q9BT23 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LIMD2Q9BT23 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 FEM1AP3-201ENST00000403722 1741 ntBASIC11□□□□□ -0.65
LIMD2Q9BT23 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11□□□□□ -0.65
LIMD2Q9BT23 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 UBQLN4P1-201ENST00000461599 1801 ntBASIC11□□□□□ -0.65
LIMD2Q9BT23 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC11□□□□□ -0.65
LIMD2Q9BT23 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11□□□□□ -0.65
LIMD2Q9BT23 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 AC099398.1-201ENST00000567919 2776 ntBASIC10.99□□□□□ -0.65
LIMD2Q9BT23 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AL161938.1-201ENST00000569833 2180 ntBASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 KRT18P29-201ENST00000397031 1267 ntBASIC10.99□□□□□ -0.65
LIMD2Q9BT23 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 PTPA-216ENST00000432651 857 ntTSL 2 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AC128676.1-201ENST00000454392 318 ntBASIC10.99□□□□□ -0.65
LIMD2Q9BT23 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 RNF121-214ENST00000533380 870 ntTSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC10.99□□□□□ -0.65
LIMD2Q9BT23 AL353708.3-201ENST00000610272 989 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms