Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 AC024563.2-201ENST00000603282 481 ntBASIC18.64■□□□□ 0.57
HHIPQ96QV1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.57
HHIPQ96QV1 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.57
HHIPQ96QV1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.64■□□□□ 0.57
HHIPQ96QV1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HHIPQ96QV1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HHIPQ96QV1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.63■□□□□ 0.57
HHIPQ96QV1 VENTXP7-201ENST00000475503 772 ntBASIC18.63■□□□□ 0.57
HHIPQ96QV1 AC091607.1-201ENST00000490318 1060 ntBASIC18.63■□□□□ 0.57
HHIPQ96QV1 AP005901.3-202ENST00000581653 237 ntBASIC18.63■□□□□ 0.57
HHIPQ96QV1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.63■□□□□ 0.57
HHIPQ96QV1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
HHIPQ96QV1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HHIPQ96QV1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 AL590627.1-203ENST00000421194 1026 ntBASIC18.62■□□□□ 0.57
HHIPQ96QV1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.62■□□□□ 0.57
HHIPQ96QV1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.62■□□□□ 0.57
HHIPQ96QV1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.62■□□□□ 0.57
HHIPQ96QV1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.62■□□□□ 0.57
HHIPQ96QV1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HHIPQ96QV1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 RN7SL606P-201ENST00000472779 293 ntBASIC18.61■□□□□ 0.57
HHIPQ96QV1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 MIR3180-4-201ENST00000582223 153 ntBASIC18.61■□□□□ 0.57
HHIPQ96QV1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HHIPQ96QV1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HHIPQ96QV1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms