Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CASD1Q96PB1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.64■□□□□ 0.74
CASD1Q96PB1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASD1Q96PB1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 AC005336.2-201ENST00000593183 939 ntBASIC19.64■□□□□ 0.73
CASD1Q96PB1 BX640515.1-201ENST00000617215 977 ntBASIC19.64■□□□□ 0.73
CASD1Q96PB1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
CASD1Q96PB1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 AC005332.7-201ENST00000614046 2005 ntBASIC19.64■□□□□ 0.73
CASD1Q96PB1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASD1Q96PB1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASD1Q96PB1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CASD1Q96PB1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 AC112777.1-201ENST00000540175 1423 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 RCN1P2-201ENST00000398357 915 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 AL590627.1-203ENST00000421194 1026 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 FAM197Y8-203ENST00000450145 560 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 AC132008.2-207ENST00000454517 770 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 AC064862.7-201ENST00000604520 867 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 AC120114.3-201ENST00000611923 658 ntBASIC19.62■□□□□ 0.73
CASD1Q96PB1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.62■□□□□ 0.73
CASD1Q96PB1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASD1Q96PB1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 AL671883.3-201ENST00000603274 991 ntBASIC19.61■□□□□ 0.73
CASD1Q96PB1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 AC023511.2-201ENST00000618803 211 ntBASIC19.61■□□□□ 0.73
CASD1Q96PB1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASD1Q96PB1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.61■□□□□ 0.73
CASD1Q96PB1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASD1Q96PB1 AC073130.3-201ENST00000624389 2278 ntBASIC19.6■□□□□ 0.73
CASD1Q96PB1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.6■□□□□ 0.73
CASD1Q96PB1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms