Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC97Q96F63 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC97Q96F63 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC97Q96F63 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC97Q96F63 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC97Q96F63 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 AC096733.2-201ENST00000609937 1394 ntBASIC18.82■□□□□ 0.6
CCDC97Q96F63 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 AC006333.2-201ENST00000607957 2099 ntBASIC18.82■□□□□ 0.6
CCDC97Q96F63 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 MFAP1P1-201ENST00000442257 1255 ntBASIC18.82■□□□□ 0.6
CCDC97Q96F63 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 CYP2D8P-201ENST00000433633 1490 ntBASIC18.82■□□□□ 0.6
CCDC97Q96F63 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC97Q96F63 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC97Q96F63 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 CRYGFP-201ENST00000418459 633 ntBASIC18.81■□□□□ 0.6
CCDC97Q96F63 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC97Q96F63 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC97Q96F63 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 DGCR10-201ENST00000609839 495 ntBASIC18.8■□□□□ 0.6
CCDC97Q96F63 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.8■□□□□ 0.6
CCDC97Q96F63 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC97Q96F63 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC97Q96F63 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC97Q96F63 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC97Q96F63 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms